Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna22713.1-v1.0-hybrid |
Family | CBM43 |
Protein Properties | Length: 270 Molecular Weight: 28576.5 Isoelectric Point: 8.2985 |
Chromosome | Chromosome/Scaffold: 4 Start: 47382 End: 48191 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 142 | 224 | 5e-34 |
WCVAKPTVPDPIVQAAMDYACGSGADCKSIQPNGSCYQPATLLSHASYAFNSYWQTRKVAGGTCDFGGTAMLVTVDPSKSHSC |
Full Sequence |
---|
Protein Sequence Length: 270 Download |
MNCFRTDARS LSQTQKAEQH RSTTQTVKKL KLTNHIDIPV VQASSPFSSP PSDSPAPNPL 60 PSPALPLPYC VNPQPPNPAL SPTYPPQNGP SPHQPCIILS PPQIPPTPPI SPLTPPSPKA 120 QSPPPTGPKN TPPHKNPQFA VWCVAKPTVP DPIVQAAMDY ACGSGADCKS IQPNGSCYQP 180 ATLLSHASYA FNSYWQTRKV AGGTCDFGGT AMLVTVDPSK SHSCTTGPSS FCIISPDCQR 240 PPSLCVFIFR ALDSPETNSN NPEIRSGIL* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-24 | 142 | 212 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-36 | 142 | 224 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 9e-16 | 142 | 219 | 13 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|