Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna23031.1-v1.0-hybrid |
Family | GH32 |
Protein Properties | Length: 950 Molecular Weight: 105429 Isoelectric Point: 5.2897 |
Chromosome | Chromosome/Scaffold: 4 Start: 23062500 End: 23072574 |
Description | Glycosyl hydrolases family 32 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH32 | 363 | 680 | 0 |
HFQPCKNWMNGPMVYKNVYHHFYQYNPDGVAWSPNIVWAHSTSTDLVNWTPHDEALYPSEPFDINGCWSGSATILPGEKPAMFYTGINSQTEQVQNLAFP KNLSDPFLREWIKIPQNPLMMPTQANQIIVDSFRDPTTAWLGSDNRWRLVIGSRKNQTGLAILYTSEDFLNWTMASHPFHSAKENGMWECPDFFPVSKST PIGLDTSTNGADVKHVLKISLFDIAKEYYTIGTYNLDKDVYIPDQGSVESDSGLRFDYGKFYASKSFFDSVKNRRILWGWSNESSSAEDDIKKGWSGLQT IPRTILLDKSGKQLVQWP |
Full Sequence |
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Protein Sequence Length: 950 Download |
MGCALTFQTT PNARAVNRFR IVRLIVTALP KAKMIFSSLW HFCILSLLLS HGVVELEASH 60 HVYSNLQTSE LTSAHTELVI ISSLPRIGST YNPKGVVWGN IVWAHSTSTD LISWIPHDDA 120 IYPSESFDSN GCWSGSATIL LGAKKTEMWE CPDFFPVSKT SLLGLDTSKN GADVKHVLKV 180 SLKNKDIYTI GTYNVDKDIY IPDKGSVEND SGFRYDDVEN KACPNIMLKG GSVHDVLGVT 240 PAQADVGITF EMSDLKKAEV FDPSWTSPQT LCSKKGSSLN QDNDMTTYGT FVNVDPLHEK 300 LSLRSLIDHS IVESFGGLGK ACITARVYPT LAVDGSADAC SSFLKFELPS TRQAREPYRT 360 GYHFQPCKNW MNGPMVYKNV YHHFYQYNPD GVAWSPNIVW AHSTSTDLVN WTPHDEALYP 420 SEPFDINGCW SGSATILPGE KPAMFYTGIN SQTEQVQNLA FPKNLSDPFL REWIKIPQNP 480 LMMPTQANQI IVDSFRDPTT AWLGSDNRWR LVIGSRKNQT GLAILYTSED FLNWTMASHP 540 FHSAKENGMW ECPDFFPVSK STPIGLDTST NGADVKHVLK ISLFDIAKEY YTIGTYNLDK 600 DVYIPDQGSV ESDSGLRFDY GKFYASKSFF DSVKNRRILW GWSNESSSAE DDIKKGWSGL 660 QTIPRTILLD KSGKQLVQWP IEELEKLRTE HVKLPSSLIK GGSLHEVLGV ATTQADVEVT 720 FEISNFEKAE VLDQSWTDPQ ILCSNKDASV DGSLGPFGLL VLASEGLQEY TAVFYRIYKS 780 HNNKYVVLMC SDQSRSSLNE NNDKTTYGAF VNVDPVHEKL SLRSLIDHSI VESFGGEGKV 840 CITARVYPTL VVDGRLRFVG VWQWRLTDAG LEADSGTGDE ARYGVHDGED DTEDLRQGDG 900 VHGESTTLLC SESKQSSNDA VTTRIMTQLL LHGPDQAEGA TTAQASWKL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00640 | Glyco_32 | 9.0e-8 | 228 | 319 | 113 | + Glycosyl hydrolases family 32. | ||
smart00640 | Glyco_32 | 5.0e-10 | 107 | 216 | 112 | + Glycosyl hydrolases family 32. | ||
smart00640 | Glyco_32 | 1.0e-21 | 91 | 140 | 50 | + Glycosyl hydrolases family 32. | ||
pfam00251 | Glyco_hydro_32N | 6.0e-133 | 363 | 680 | 329 | + Glycosyl hydrolases family 32 N-terminal domain. This domain corresponds to the N-terminal domain of glycosyl hydrolase family 32 which forms a five bladed beta propeller structure. | ||
smart00640 | Glyco_32 | 2.0e-168 | 363 | 838 | 489 | + Glycosyl hydrolases family 32. |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2qqw_A | 0 | 356 | 852 | 2 | 505 | A Chain A, Crystal Structure Of A Cell-Wall Invertase (D23a) From Arabidopsis Thaliana In Complex With Sucrose |
PDB | 2qqw_A | 1e-28 | 221 | 337 | 344 | 509 | A Chain A, Crystal Structure Of A Cell-Wall Invertase (D23a) From Arabidopsis Thaliana In Complex With Sucrose |
PDB | 2qqw_A | 3e-18 | 91 | 144 | 36 | 89 | A Chain A, Crystal Structure Of A Cell-Wall Invertase (D23a) From Arabidopsis Thaliana In Complex With Sucrose |
PDB | 2qqw_A | 0.00000000004 | 133 | 216 | 182 | 270 | A Chain A, Crystal Structure Of A Cell-Wall Invertase (D23a) From Arabidopsis Thaliana In Complex With Sucrose |
PDB | 2qqu_A | 0 | 356 | 852 | 2 | 505 | A Chain A, Crystal Structure Of A Cell-Wall Invertase (D239a) From Arabidopsis Thaliana In Complex With Sucrose |
Sequence Alignments (This image is cropped. Click for full image.) |
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