Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna23065.1-v1.0-hybrid |
Family | GH35 |
Protein Properties | Length: 891 Molecular Weight: 98434.1 Isoelectric Point: 8.279 |
Chromosome | Chromosome/Scaffold: 4 Start: 23347645 End: 23354344 |
Description | beta galactosidase 1 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 85 | 387 | 0 |
VINGQRRILISGSIHYPRSTPEMWPDLIQRAKDGGLDVIQTYVFWNGHEPSPGKYYFEDNYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKY IPGIQFRTDNGPFKDQMQRFTTKIVNMMKAERLFESHGGPIILSQIENEYGPMEYEIGAPGKAYTDWAAQMAVGLGTGVPWVMCKQDDAPDPVINACNGF YCDYFSPNKAYKPKMWTEAWTGWFTEFGGAVPYRPAEDLAFSVAKFIQKGGAFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKD LHR |
Full Sequence |
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Protein Sequence Length: 891 Download |
MWVPKGLSRI RVPAGPPHPH SQSHSPSPYS TEGEGLGKLA ALVWADVMGL KLVMWNVVVA 60 ATLVVLCSCF ASVRASVSYD SKAIVINGQR RILISGSIHY PRSTPEMWPD LIQRAKDGGL 120 DVIQTYVFWN GHEPSPGKYY FEDNYDLVKF IKLVQQAGLY VHLRIGPYVC AEWNFGGFPV 180 WLKYIPGIQF RTDNGPFKDQ MQRFTTKIVN MMKAERLFES HGGPIILSQI ENEYGPMEYE 240 IGAPGKAYTD WAAQMAVGLG TGVPWVMCKQ DDAPDPVINA CNGFYCDYFS PNKAYKPKMW 300 TEAWTGWFTE FGGAVPYRPA EDLAFSVAKF IQKGGAFINY YMYHGGTNFG RTAGGPFIAT 360 SYDYDAPLDE YGLLRQPKWG HLKDLHRAIK LCEPALVSSD PTVTPLGTYQ EAHVFKSNSG 420 ACAAFLANYN RKSFAKVAFG NMHYNLPPWS ISILPDCKNT VYNTARIGAQ TARMKMPRVP 480 IHGGFSWQAY NDETATYSDT SFTTAGLLEQ INTTRDATDY LWYMTDVKID PSEDFLRSGN 540 YPVLTVLSAG HALRVFINGQ LAGTAYGSLE TPKLTFKQGV NLRAGINQIA LLSIAVGLPN 600 VGPHFETWNA GILGPVILNG LNEGRRDLSW QKWSYKIGLK GEALSLHSLT GSSSVDWTEG 660 SFVAQRQPLT WYKTTFNRPA GNSPLALDMG SMGKGQVWIN GRSIGRYWPA YKASGTCGEC 720 NYAGTFSEKK CLCNCGEASQ RWYHVPRSWL NPAGNLLVVL EEWGGDPNGI FLVRREVDSV 780 CADIYEWQPN LMSWQMQVSG RVNKPLRPKA HLSCGPGQKI SSIKFASFGT PEGVCGSFRE 840 GGCHAHKSYN AFERSCIGQN SCSVTVSPEN FGGDPCPNVM KKLSVEAICN * 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 1.0e-5 | 99 | 235 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 6.0e-24 | 812 | 889 | 81 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 1.0e-25 | 77 | 379 | 370 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-164 | 83 | 389 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 63 | 890 | 829 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 5.60519e-45 | 83 | 385 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 9.99995e-41 | 76 | 459 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 9.99995e-41 | 76 | 459 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Sequence Alignments (This image is cropped. Click for full image.) |
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