PlantCAZyme

Basic Information
Species	Fragaria vesca
Cazyme ID	mrna23206.1-v1.0-hybrid
Family	CE8
Protein Properties	Length: 455 Molecular Weight: 48231 Isoelectric Point: 5.6445
Chromosome	Chromosome/Scaffold: 7 Start: 14581755 End: 14591467
Description	methylesterase PCR A
View CDS

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
CE8	227	369	1.09301e-43
TVVAQDGLGDFVSIMDAVDVVPENSHNCVIRIKTGVYDEIVTVGKKKCNVVFIGDCVKTTVVIGNRSNIKGVRTFESATLVIEGDGFLATGITFVNMVEP EAGQAVAVRISSYHTAFYRCRIADFQDTLYTQDGVQFFKDQGV

Full Sequence
Protein Sequence Length: 455 Download
MKIKVGWVLV VALLVSVFFA PTAYAVWRNK NTEVANFASV ADDHDGNDEE DGCTGSVCNI 60 VQFPCHEGCV CVPIGMLPIG ICAGTCCGTP SPSPSPTPPS PPEPPSPAPK PPTPPHPSPP 120 APPKPPTPPH PSPPTPPKPP TPPHPSPPAP PKPPTPPHPS PPAPPKPPNP PHPSPPTPPH 180 PSPPAPPHPS PPTPPHPSPP APPKPPSPCP TPPPHPSDAS ALSSEATVVA QDGLGDFVSI 240 MDAVDVVPEN SHNCVIRIKT GVYDEIVTVG KKKCNVVFIG DCVKTTVVIG NRSNIKGVRT 300 FESATLVIEG DGFLATGITF VNMVEPEAGQ AVAVRISSYH TAFYRCRIAD FQDTLYTQDG 360 VQFFKDQGVS RETVVEILYH VVIMESFLDT FIDPIGWLDW DNRLSLDIIE YVEYANRGPS 420 ADTSGKVTWR GLEVLHDSIE VLHDSIVAAQ LMAR*

Full Sequence

Protein Sequence Length: 455 Download

MKIKVGWVLV VALLVSVFFA PTAYAVWRNK NTEVANFASV ADDHDGNDEE DGCTGSVCNI    60
VQFPCHEGCV CVPIGMLPIG ICAGTCCGTP SPSPSPTPPS PPEPPSPAPK PPTPPHPSPP    120
APPKPPTPPH PSPPTPPKPP TPPHPSPPAP PKPPTPPHPS PPAPPKPPNP PHPSPPTPPH    180
PSPPAPPHPS PPTPPHPSPP APPKPPSPCP TPPPHPSDAS ALSSEATVVA QDGLGDFVSI    240
MDAVDVVPEN SHNCVIRIKT GVYDEIVTVG KKKCNVVFIG DCVKTTVVIG NRSNIKGVRT    300
FESATLVIEG DGFLATGITF VNMVEPEAGQ AVAVRISSYH TAFYRCRIAD FQDTLYTQDG    360
VQFFKDQGVS RETVVEILYH VVIMESFLDT FIDPIGWLDW DNRLSLDIIE YVEYANRGPS    420
ADTSGKVTWR GLEVLHDSIE VLHDSIVAAQ LMAR* 

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
pfam01095	Pectinesterase	3.0e-16	381	442	62	+ Pectinesterase.
PLN02201	PLN02201	3.0e-37	228	370	144	+ probable pectinesterase/pectinesterase inhibitor
PLN02416	PLN02416	8.0e-42	224	437	284	+ probable pectinesterase/pectinesterase inhibitor
PLN02745	PLN02745	2.0e-42	218	435	288	+ Putative pectinesterase/pectinesterase inhibitor
pfam01095	Pectinesterase	1.0e-50	228	366	140	+ Pectinesterase.

Gene Ontology
GO Term	Description
GO:0005618	cell wall
GO:0030599	pectinesterase activity
GO:0042545	cell wall modification

Annotations - PDB Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
PDB	1gq8_A	5e-29	228	364	10	147	A Chain A, Pectin Methylesterase From Carrot
PDB	1gq8_A	0.00000000002	380	440	232	292	A Chain A, Pectin Methylesterase From Carrot
PDB	1xg2_A	4e-25	228	437	6	285	B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein

Orthologous Group
Species	ID
Fragaria vesca	mrna23297.1-v1.0-hybrid

Signal Peptide

Cleavage Site
25

CAZyme Information