| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna23297.1-v1.0-hybrid |
| Family | CE8 |
| Protein Properties | Length: 283 Molecular Weight: 31498.6 Isoelectric Point: 4.7154 |
| Chromosome | Chromosome/Scaffold: 7 Start: 14344639 End: 14347588 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 31 | 174 | 0 |
| VVAQDGLGDFASIMDAVDTLPEDSPDRFIIRIKAGVYDEIVTVGKKKLNVVFIGDGVDSTVVTGNRSNVGGVRTFESATLVIEGDGFLATGITFENRAGP KAEQAVAVRINSYRTAFYRCRIASFQDTLYTQDGVQFFRECEIY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 283 Download |
| MGREVPAKTG NLTRLGDKEL REIVEGIYFR VVAQDGLGDF ASIMDAVDTL PEDSPDRFII 60 RIKAGVYDEI VTVGKKKLNV VFIGDGVDST VVTGNRSNVG GVRTFESATL VIEGDGFLAT 120 GITFENRAGP KAEQAVAVRI NSYRTAFYRC RIASFQDTLY TQDGVQFFRE CEIYDPVGWL 180 DWDNRSALDT IEYVEYANRG PGADMSKRVT WSGFEVLHDS ISAAQFTVWQ FIDGASWIPS 240 TGIPNDLDFR RVTLTSMGVR LTSRDWLSIV FLHVMFFTCV LH* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02416 | PLN02416 | 1.0e-17 | 172 | 246 | 75 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 3.0e-20 | 175 | 234 | 60 | + Pectinesterase. | ||
| PLN02201 | PLN02201 | 2.0e-49 | 14 | 173 | 160 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02416 | PLN02416 | 3.0e-50 | 31 | 180 | 150 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 1.0e-66 | 31 | 174 | 144 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 3.00004e-41 | 31 | 213 | 10 | 189 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1gq8_A | 0.000000000000002 | 172 | 247 | 242 | 317 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 3e-34 | 31 | 213 | 6 | 185 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1xg2_A | 6e-16 | 173 | 243 | 239 | 309 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 0.00000001 | 28 | 173 | 31 | 197 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Hydropathy |
|---|
 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Fragaria vesca | mrna23206.1-v1.0-hybrid | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |