| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna24183.1-v1.0-hybrid |
| Family | GH35 |
| Protein Properties | Length: 829 Molecular Weight: 91609.8 Isoelectric Point: 7.2947 |
| Chromosome | Chromosome/Scaffold: 1 Start: 10715215 End: 10725701 |
| Description | beta-galactosidase 10 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 136 | 232 | 1.2e-40 |
| QWPKKMWPGLVQTAKEGGVDVIETYVFWNGHEPSPGNYYFGGRYDLVKFAKIVEDAGMYLILRIGPFVAAEWYFGGVPVWLHYVPDTVFRTDNEPFK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 829 Download |
| MKRTCVSAHG APFATVRRRR GRASTPTDSS SVPDHFLSPA SPDRRRGKMI GDAVRVRWGG 60 GAPSSTPKGD ERSSFVRTTD VHSTSFPVHS ILDILSSFCK KKDEGVKTSL AAFFAAVLYI 120 VFGIQCKLRQ ALFDYQWPKK MWPGLVQTAK EGGVDVIETY VFWNGHEPSP GNYYFGGRYD 180 LVKFAKIVED AGMYLILRIG PFVAAEWYFG GVPVWLHYVP DTVFRTDNEP FKIENEYGYY 240 EKDYGEGGKK YAQWSASMAV AQNIGVPWIM CQQFDAPESV YHGGTNFGRT SGGPFITTSY 300 DYEAPIDEYG LPRLPKWAHL KQLHLAIKLC EHILLNSEPT LVPLGPSEEA DVFTNSSGAC 360 AAFISNMDDK NDKTVVFRNV SYHLPAWSVS ILPDCKTEVF NTAKVASQTS VVEMTSETKG 420 LKGLKWEVFV EKAGIWGEAD FFKSGFVDHI NTTRFTTDYL WYTTSIFVDE NEDFLKKGSL 480 PVLQIESKGH ALHAFVNDKL QDSASGNGTH PPFSLKSPIS LKAGKNEIAL LSMTVGLQNA 540 GSFYEWVGAG VTSVKIKGFN NGTIDLSAHN WTYKIGVQGE HLGLYKGDGL SNITWISTAE 600 PPKEQPLTWY KAIVDAPPGD EPIGLDMIHM GKGLAWLNGE EIGRYWPRKS PTHGCVQECN 660 YRGKFDPDKC NTGCGEPTQR WYHVPRSWFK PSGNVLVIFE EKGGNPLKME FSRRKISGAC 720 ALAAVDYPSV DLESWREGNG SNKSISTINL KCPENTHIST VKFASFGNPT GSCGSYTKGD 780 CHDPNSTSVV EKICLHQNNC AIELTEEKFS KGLCSSVTKK LAVEVVCN* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02140 | Gal_Lectin | 2.0e-16 | 750 | 827 | 81 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 3.0e-18 | 281 | 327 | 50 | + Glycosyl hydrolases family 35. | ||
| pfam01301 | Glyco_hydro_35 | 8.0e-49 | 138 | 288 | 184 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 6.0e-50 | 140 | 280 | 172 | + beta-galactosidase; Provisional | ||
| PLN03059 | PLN03059 | 1.0e-180 | 280 | 828 | 554 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 2e-17 | 138 | 234 | 35 | 130 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 8e-16 | 128 | 216 | 20 | 108 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Transmembrane Domains | |||||
|---|---|---|---|---|---|
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| Start | End | ||||
| 108 | 125 | ||||
| Hydropathy |
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| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Vitis vinifera | GSVIVT01022324001 | GSVIVT01012605001 | GSVIVT01001735001 | GSVIVT01003541001 | GSVIVT01003629001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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