| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna24290.1-v1.0-hybrid |
| Family | AA1 |
| Protein Properties | Length: 906 Molecular Weight: 102616 Isoelectric Point: 4.7658 |
| Chromosome | Chromosome/Scaffold: 6 Start: 30585059 End: 30590408 |
| Description | laccase 14 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 325 | 877 | 0 |
| AEVYYHDFIVKEVNFTRLCESKLMLVVNESYPGPAIRARKGDTIYVNVYNQGYYGFTIHWQVPSHNLLFLHGVKQPRNPWFDGPEYVTQCPILPGTNFTY QVQLSTEEGTLWWHAHSDWTRASVHGAIVVLPALGTTFPFPEPDEEEIIVFGSWYLGNLKEQVDECLEPATNSNLPIAAGYTVNGRLGDFSPCSKNTTYR RKVDYGKTYLLRIVNANIDVEFYFAIAEHNLTVVGLDGSYAKPINTDLIVIAPGQTMDVLLNANSTQGRYYYMVGREYLSATVDTASDDDAIAILEYNGN YTTSEAPLFPEQIPDSLSQAPALNFYRKIRSLATPEYPVNVPKESDVTTRMYITASANALYCTEDLGPTCFNISFAASVNNISWANPSESILQAYYKNIS EPVYETDFPDEPPVYFNFTEIAMTLDPVLTVQGTKVKVLEYNETVEMVFQGTEVMGGSVNHPMHLHGHSFYVLGFGYGNYFAERDSKTFNLIDPPYVATF ITPKNGWLAIRFVANNPGVWFWHCHMERHLTWGMESAFIIKDGGTPETSMLPP | |||
| Full Sequence |
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| Protein Sequence Length: 906 Download |
| MEDGDAVLKR AHADYGGYEE DVIVDILARL PVKSLMRFRC VCKSWRALIS DPYFVKKHFS 60 WRTETYKLNF NIDPPLFLDL KALKDVKNEV SFKGIDSIML WNPCTRDSKV LSNPPLVIEP 120 KDSNYYYHGF GYDSATDDYK VMRGFAYDAN GAEKFMTQIF ALKTGSWRTV KDIDYVELTE 180 GQGVFLNGAL HWLGDLSDGD RKILSFDLGA EKFQETIPLP YDDWFTDLLI HRNRLCVCTR 240 PTKSNSCHIW MMKEYGVKES WTELVQFSLD NYVWGPEDHR HYVSPVCILE NGVVLIDGLG 300 CYEWLMFAVF AVLIILKVLI SLAQAEVYYH DFIVKEVNFT RLCESKLMLV VNESYPGPAI 360 RARKGDTIYV NVYNQGYYGF TIHWQVPSHN LLFLHGVKQP RNPWFDGPEY VTQCPILPGT 420 NFTYQVQLST EEGTLWWHAH SDWTRASVHG AIVVLPALGT TFPFPEPDEE EIIVFGSWYL 480 GNLKEQVDEC LEPATNSNLP IAAGYTVNGR LGDFSPCSKN TTYRRKVDYG KTYLLRIVNA 540 NIDVEFYFAI AEHNLTVVGL DGSYAKPINT DLIVIAPGQT MDVLLNANST QGRYYYMVGR 600 EYLSATVDTA SDDDAIAILE YNGNYTTSEA PLFPEQIPDS LSQAPALNFY RKIRSLATPE 660 YPVNVPKESD VTTRMYITAS ANALYCTEDL GPTCFNISFA ASVNNISWAN PSESILQAYY 720 KNISEPVYET DFPDEPPVYF NFTEIAMTLD PVLTVQGTKV KVLEYNETVE MVFQGTEVMG 780 GSVNHPMHLH GHSFYVLGFG YGNYFAERDS KTFNLIDPPY VATFITPKNG WLAIRFVANN 840 PGVWFWHCHM ERHLTWGMES AFIIKDGGTP ETSMLPPPAT MPSCDVPLDS ATLPSNSELN 900 KNQIE* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 4.0e-42 | 334 | 456 | 125 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 1.0e-55 | 309 | 863 | 584 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 3.0e-64 | 307 | 874 | 600 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 6.0e-69 | 343 | 862 | 552 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 325 | 884 | 562 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0005515 | protein binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 325 | 862 | 1 | 521 | A Chain A, Structure Of Human Haspin Kinase Domain |
| PDB | 1asq_A | 0 | 325 | 862 | 1 | 521 | A Chain A, Structure Of Human Haspin Kinase Domain |
| PDB | 1asp_B | 0 | 325 | 862 | 1 | 521 | A Chain A, Structure Of Human Haspin Kinase Domain |
| PDB | 1asp_A | 0 | 325 | 862 | 1 | 521 | A Chain A, Structure Of Human Haspin Kinase Domain |
| PDB | 1aso_B | 0 | 325 | 862 | 1 | 521 | A Chain A, Structure Of Human Haspin Kinase Domain |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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