| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna24292.1-v1.0-hybrid |
| Family | AA1 |
| Protein Properties | Length: 521 Molecular Weight: 57770.7 Isoelectric Point: 4.2989 |
| Chromosome | Chromosome/Scaffold: 6 Start: 30595442 End: 30597861 |
| Description | laccase 14 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 49 | 492 | 0 |
| SSYQHGVKQPRNPWFDGPEYVTQCPILPGTNFTYQVQLSTEEGTLWWHAHSDWTRASVHGAIVVLPALVTTFPFPEPDEEEIIVFGSWYLGNLKEEVDEC LDPATNSNLPIADGYTINGRLGDFSACSQNTTYRRKVDYGKTYLLRIVNANIDVEFYFAIAEHSLTVVGLDGSYTKPINTGYILIAPGQTMDVLLNASSS LGRYYMVGREYISATVETLSDTANDAIAILEYNGNYTTSETPLFPDQIPNSLSQEPAFSFYGKLRSLATPEYPASVPKESEVTTRMYITASANALYCTED LGPSCVNISFAASVNNISWANPRESVLQAYYKNISEPVYETDFPDEPPTYFNFTEIAMTLDPVLTVQGTKVKVLEYNETVEMVFQGTDVMGGSVNHPMHL HGHSFFVLGFGFGNYLAQRDSKTFNLIDPPCVVLALSYGETFVM | |||
| Full Sequence |
|---|
| Protein Sequence Length: 521 Download |
| MATQFLVFAV LIVILLVFSS FAQCEVHYHD FIDITDSPFT GKSLHTTSSS YQHGVKQPRN 60 PWFDGPEYVT QCPILPGTNF TYQVQLSTEE GTLWWHAHSD WTRASVHGAI VVLPALVTTF 120 PFPEPDEEEI IVFGSWYLGN LKEEVDECLD PATNSNLPIA DGYTINGRLG DFSACSQNTT 180 YRRKVDYGKT YLLRIVNANI DVEFYFAIAE HSLTVVGLDG SYTKPINTGY ILIAPGQTMD 240 VLLNASSSLG RYYMVGREYI SATVETLSDT ANDAIAILEY NGNYTTSETP LFPDQIPNSL 300 SQEPAFSFYG KLRSLATPEY PASVPKESEV TTRMYITASA NALYCTEDLG PSCVNISFAA 360 SVNNISWANP RESVLQAYYK NISEPVYETD FPDEPPTYFN FTEIAMTLDP VLTVQGTKVK 420 VLEYNETVEM VFQGTDVMGG SVNHPMHLHG HSFFVLGFGF GNYLAQRDSK TFNLIDPPCV 480 VLALSYGETF VMGYGVCFYS EERGHTGDYN APSSGYNAFL * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00394 | Cu-oxidase | 6.0e-27 | 134 | 283 | 152 | + Multicopper oxidase. Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. | ||
| PLN02191 | PLN02191 | 7.0e-30 | 53 | 478 | 450 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 1.0e-37 | 53 | 477 | 456 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 3.0e-40 | 43 | 478 | 466 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 8.0e-141 | 53 | 478 | 431 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 1e-27 | 43 | 491 | 51 | 493 | A Chain A, Ascorbate Peroxidase R38k Mutant |
| PDB | 1asq_A | 1e-27 | 43 | 491 | 51 | 493 | A Chain A, Ascorbate Peroxidase R38k Mutant |
| PDB | 1asp_B | 1e-27 | 43 | 491 | 51 | 493 | A Chain A, Ascorbate Peroxidase R38k Mutant |
| PDB | 1asp_A | 1e-27 | 43 | 491 | 51 | 493 | A Chain A, Ascorbate Peroxidase R38k Mutant |
| PDB | 1aso_B | 1e-27 | 43 | 491 | 51 | 493 | A Chain A, Ascorbate Peroxidase R38k Mutant |
