| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna24295.1-v1.0-hybrid |
| Family | AA1 |
| Protein Properties | Length: 578 Molecular Weight: 64494.9 Isoelectric Point: 4.6215 |
| Chromosome | Chromosome/Scaffold: 6 Start: 30614233 End: 30617961 |
| Description | laccase 14 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 66 | 544 | 0 |
| RHGVKQPRNPWFDGPEYVTQCPILPGTNFTYQVQLSTEEGTLWWHAHSDWTRASVHGAIAVLPALGTTFPFPEPDEEEIIVFGTWYLGNLKEQVDKCLDP ATNSDLPKASGYTINGQPGDFSPCSTNTTYRRKVDCGKTYLLRIVNANMDEEFYFAIAEHSLTVVGLDGSYTKPINTNYIVIAPGQTMDVLLNTSSTLGS YYMVGREYLNSNVDKPIADHDAIAILEYNGNYTTSAAPLFPQQIPNSLSQEPAFNFYGKLRSLATPEYPVNVPQESDITTKMYITASSNALYCTPDFDPT CFNISFAASVNNISWANPSESILQAYYMNISEPVYETDFPDEPPVYFNFTEKTTTLDRVLTVQGTKVKVLEYNETVEMVFQGTEVMGGSANHPMHLHGHS FYVLGFGFGNYFAERDSKTFNLIDPPYVSTFITPKKGWLAIRFIANNPGVWFWHCHMERHMTWGMESAFMVKNGGTPET | |||
| Full Sequence |
|---|
| Protein Sequence Length: 578 Download |
| MATQFLVFAV LIVILLFDYL FPSSILVVLG TILNRGREPS ASNQAIKDEE STNSTVGFFK 60 FALRIRHGVK QPRNPWFDGP EYVTQCPILP GTNFTYQVQL STEEGTLWWH AHSDWTRASV 120 HGAIAVLPAL GTTFPFPEPD EEEIIVFGTW YLGNLKEQVD KCLDPATNSD LPKASGYTIN 180 GQPGDFSPCS TNTTYRRKVD CGKTYLLRIV NANMDEEFYF AIAEHSLTVV GLDGSYTKPI 240 NTNYIVIAPG QTMDVLLNTS STLGSYYMVG REYLNSNVDK PIADHDAIAI LEYNGNYTTS 300 AAPLFPQQIP NSLSQEPAFN FYGKLRSLAT PEYPVNVPQE SDITTKMYIT ASSNALYCTP 360 DFDPTCFNIS FAASVNNISW ANPSESILQA YYMNISEPVY ETDFPDEPPV YFNFTEKTTT 420 LDRVLTVQGT KVKVLEYNET VEMVFQGTEV MGGSANHPMH LHGHSFYVLG FGFGNYFAER 480 DSKTFNLIDP PYVSTFITPK KGWLAIRFIA NNPGVWFWHC HMERHMTWGM ESAFMVKNGG 540 TPETSMLPPP ATMPSCEVPL DSATLPSNSE LMKNQIE* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam07731 | Cu-oxidase_2 | 5.0e-38 | 403 | 539 | 141 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. |
| PLN02191 | PLN02191 | 8.0e-44 | 67 | 534 | 501 | + L-ascorbate oxidase |
| PLN02604 | PLN02604 | 3.0e-53 | 67 | 534 | 493 | + oxidoreductase |
| TIGR03388 | ascorbase | 1.0e-53 | 67 | 534 | 491 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| TIGR03389 | laccase | 0 | 67 | 556 | 495 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 2.8026e-45 | 67 | 534 | 62 | 521 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1asq_A | 2.8026e-45 | 67 | 534 | 62 | 521 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1asp_B | 2.8026e-45 | 67 | 534 | 62 | 521 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1asp_A | 2.8026e-45 | 67 | 534 | 62 | 521 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1aso_B | 2.8026e-45 | 67 | 534 | 62 | 521 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
