Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna24411.1-v1.0-hybrid |
Family | GT48 |
Protein Properties | Length: 1975 Molecular Weight: 227694 Isoelectric Point: 9.5186 |
Chromosome | Chromosome/Scaffold: 3 Start: 31078800 End: 31093556 |
Description | glucan synthase-like 12 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT48 | 1075 | 1829 | 0 |
VPSNLEARRRISFFSNSLFMDMPPAPKVRNMLSFSVLTPYYTEEVLFSIEGLERPNEDGVSILFYLQKIFPDEWTNFLLRVNCSSEDELKGSDELEEELR LWASYRGQTLTRTVRGMMYYRKALELQAFLDMAKDEDLMEGYKAIELNSEDQSKEGRSLWAQCQAVADMKFTYVVSCQLYGIQKRSGDYRAQDILRLMTT YPSLRVAYIDEVEEPSKDRSQKINQKAYYSTLVKAAMPKSIDSSEPVQNLDQVIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEAL KMRNLLQEFLKHDGVRHPTILGLREHIFTGSVSSLAWFMSNQENSFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLSRGGVSKASKVINLSEDIFAGFNS TLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDIYRLGHRFDFFRMLSCYFTTIGFYYSTLITVLTVYVFLYGRLYLVLSGLEEGLNT QEAIRDNKPLQVALASQSFVQIGFLMALPMLMEIGLEKGFRTALSEFILMQLQLAPVFFTFSLGTKTHYYGRTLLHGGAKYRSTGRGFVVFHAKFADNYR LYSRSHFVKGIELLILLVVYQIFGHTYRSAVAYILITVSMWFMVVTWLFAPFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGVPPEKSWESWWEEEQEHL RYSGKRGIVAEILLSLRFFIYQYGLVYHLNIAKKTKSVLVYGISWLVIVLILFVM |
Full Sequence |
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Protein Sequence Length: 1975 Download |
MVTTHSSQHS SSSLFRGLGA MSSSRAGADQ PPQPQRRIQR TQTAGNLGET AFDSEVVPSS 60 LVEIAPILRV ANEVESHNPR VAYLCRFYAF EKAHRLDPTS SGRGVRQFKT ALLQRLEREN 120 DPTLMGRVKK SDAREMQSFY QHYYKKYIQA LQNAADKADR AQLTKAYQTA NVLFEVLKAV 180 NMTQSMEVDR EILEAHGKVA EKTELLVPYN ILPLDPDSVN QAIMKYPEIQ AAVLALRNTR 240 GLPWPKEYKK RKDEDVLDWL QSMFGFQKDN VANQREHLIL LLANVHIRQF PKPDQQPKLD 300 DRALTEVMKK LFKNYKKWCK YLGRKSSLWL PTIQQEVQQR KLLYMGLYLL IWGEAANLRF 360 MPECLCYIYH HMAFELYGML AGNVSPMTGE NVKPAYGGEE EAFLKKVVTP IYKVIAEEAE 420 RSKRGKSKHS QWRNYDDINE YFWSVDCFRL GWPMRADADF FCMPSEQHYF DKSSEDHKPA 480 GGDRWVGKVN FVEIRSFWHI FRSFDRMWSF FILCLQVMII VAWNGSGQPT SIFSADVFKK 540 ALSVFITAAI LKLGQAVLDV ILSWKSRRSM SFHVKLRYIA KVISAAAWVI ILPVTYAYTW 600 ENPPGFAQTI KGWFGNNSNS PSLFILAVVI YLSPNMLAGV LFLFPFIRRF LERSNYRIVM 660 LMMWWSQPRL YVGRGMHEGT FSLFKYTMFW VLLIVTKLAF SYYIEIKPLV GPTKAIMKVR 720 ITNFQWHEFF PRAKNNIGVV IALWAPIILV YFMDTQIWYA IYSTIFGGIY GAFRRLGEIR 780 TLGMLRSRFE SLPGAFNARL IPVDKSEPKK KGLKATLSRT FGQVEGSKEK QAARFAQLWN 840 KIISSFREED LINNREMNLL LVPYWADRDL DLIQWPPFLL ASKIPIALDM AKDSNGKDKE 900 LTKRILADEY MHCAVRECYA SFRNIIKFLV QGNREKEVIE YIFSEVDKHI AEGTLIREFK 960 MSALPSLYDH FVRLIDFLSK NNQDDRDQVV ILFQDMLEVV TRDIMMEDHI SSLVDSVHGG 1020 SGHEGMIPLD QHQQHQLFAS AGAIKFPLTQ VTEAWKEKIN RLYLLLTTKE SAMDVPSNLE 1080 ARRRISFFSN SLFMDMPPAP KVRNMLSFSV LTPYYTEEVL FSIEGLERPN EDGVSILFYL 1140 QKIFPDEWTN FLLRVNCSSE DELKGSDELE EELRLWASYR GQTLTRTVRG MMYYRKALEL 1200 QAFLDMAKDE DLMEGYKAIE LNSEDQSKEG RSLWAQCQAV ADMKFTYVVS CQLYGIQKRS 1260 GDYRAQDILR LMTTYPSLRV AYIDEVEEPS KDRSQKINQK AYYSTLVKAA MPKSIDSSEP 1320 VQNLDQVIYR IKLPGPAILG EGKPENQNHA IIFTRGEGLQ TIDMNQDNYM EEALKMRNLL 1380 QEFLKHDGVR HPTILGLREH IFTGSVSSLA WFMSNQENSF VTIGQRLLAN PLKVRFHYGH 1440 PDVFDRLFHL SRGGVSKASK VINLSEDIFA GFNSTLREGN VTHHEYIQVG KGRDVGLNQI 1500 SMFEAKIANG NGEQTLSRDI YRLGHRFDFF RMLSCYFTTI GFYYSTLITV LTVYVFLYGR 1560 LYLVLSGLEE GLNTQEAIRD NKPLQVALAS QSFVQIGFLM ALPMLMEIGL EKGFRTALSE 1620 FILMQLQLAP VFFTFSLGTK THYYGRTLLH GGAKYRSTGR GFVVFHAKFA DNYRLYSRSH 1680 FVKGIELLIL LVVYQIFGHT YRSAVAYILI TVSMWFMVVT WLFAPFLFNP SGFEWQKIVD 1740 DWTDWNKWIS NRGGIGVPPE KSWESWWEEE QEHLRYSGKR GIVAEILLSL RFFIYQYGLV 1800 YHLNIAKKTK SVLVYGISWL VIVLILFVMK TVSVGRRKFS AEYQLVFRLI KGLIFVTFVA 1860 ILVTLIVLPH MTLQDIIVCI LAFMPTGWGM LMIAQACKPL VQKAGLWPSV RTLARGFEIV 1920 MGLLLFTPVA FLAWFPFVSE FQTRMLFNQA FSRGLQISRI LGGQRKDRST RNKE* 1980 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam04652 | DUF605 | 1.0e-10 | 64 | 178 | 124 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
pfam14288 | FKS1_dom1 | 7.0e-60 | 339 | 455 | 118 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
pfam02364 | Glucan_synthase | 0 | 1075 | 1835 | 838 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
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GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |