| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna24562.1-v1.0-hybrid |
| Family | GH35 |
| Protein Properties | Length: 2500 Molecular Weight: 347057 Isoelectric Point: 7.1913 |
| Chromosome | Chromosome/Scaffold: 1 Start: 12155038 End: 12180030 |
| Description | beta-galactosidase 7 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 76 | 377 | 0 |
| TIDGKRRILQSGSIHYPRSTPQMWPDLIRKSKEGGLDAIETYVFWNAHEPVRREYDFTGNLDLVRFLKTVQEEGLYAVLRIGPYVCAEWNYGGLPVWLHN LPNCQIRTANDVFMNEMKNFTTLIVDMMKKEKLFASQGGPIIIAQIENEYGNVESYYGDAGKAYINWCANFAESLNIGVPWIMCQQKDAPASMINTCNGW YCDTFKPSNPNTPKMWTENWTGWFKSWGGLDPLRTAEDVAFAVARFFQYGGTFQNYYMYHGGTNFDRTAASYITTSYDYDAPLDEYGHLNQPKWGHLKEL HE | |||
| Full Sequence |
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| Protein Sequence Length: 2500 Download |
| MGGKWRRGSF GMKRRRRKIS TTTPRRLEHY PSSSNLVTVH LINSVFCLIS TTLGRGNSGR 60 FVASATDVSY DGRAITIDGK RRILQSGSIH YPRSTPQMWP DLIRKSKEGG LDAIETYVFW 120 NAHEPVRREY DFTGNLDLVR FLKTVQEEGL YAVLRIGPYV CAEWNYGGLP VWLHNLPNCQ 180 IRTANDVFMN EMKNFTTLIV DMMKKEKLFA SQGGPIIIAQ IENEYGNVES YYGDAGKAYI 240 NWCANFAESL NIGVPWIMCQ QKDAPASMIN TCNGWYCDTF KPSNPNTPKM WTENWTGWFK 300 SWGGLDPLRT AEDVAFAVAR FFQYGGTFQN YYMYHGGTNF DRTAASYITT SYDYDAPLDE 360 YGHLNQPKWG HLKELHEVLK SMEHVLTYGN ITTTELGNSL STTVFATNES SGCIFGNANN 420 SVDATITFQG KTHTIPAWSV SILPDCKEEA YNTAKVNTQT TIKVKSVNKA EDELQSLQWS 480 WRPEKIHTEL LGKGEVVANR LMEQKEAAND ASDYLWYMTS VQISKDDPVL IGNMTLRINE 540 TGYILHAYVN GEHVGSQWAK YNVFNYVFEK PITLVPGVNT ISLLSATVGF PNYGGGFEDI 600 KTGIVGPVEL VGQSGDETVI KNLSERKWSY KVGLHGMKDQ LFSSASRKWS VEGLPVNRTM 660 TWYKTTFKAP LGTEPVVVDL QGLGKGNAWV NGHSIGRYWP SYLAQTDGCS LQACDYRGTY 720 DNNKCVFNCG KPTQRWYHIP RSFLQDDENT LVLFEEFGGN PSYVNFQTIR VGTICANAYE 780 NHTLKLACQG RPISAIKFAS FGNPEGTCGS FRKGTCDSTT ALSILQKECV GKESCSIDVS 840 ESMFGYTTCG DIMKRLAVEA RAKSRSRSLW KVNKNLPPRA STCIRNGIER HRLCGVQATH 900 QKVGPRQTAT WSSRSTERFI PQVEQLKSNS PILYTQCDAR FSDRGKEQYN TLPGDLFILA 960 NAKPEPISEI QLTGRSWSFA SVTHLVSSIS QIQETDGNGD VVEVEDVEEG TSLCFKIESS 1020 KEFEVDDSTS LFVAFLLNLI PSRRICNALQ MSGNLKIIKE VLCPDSVAQE NLSYKKNNDI 1080 MEKGLDDNFL SGLNKAQSGA VLACLGMLHH DAKSSVELVW GPPGTGKTKT IATLLFTLLK 1140 MNCRTLVCAP TNVAITEVAA RLLKLVTEEQ SNAMFCSLGE ILLFGDKERI KLKVGSNIED 1200 LYLGHRIQRL IECLGPQTGW RHCFASMINL LEHCVCHYNI YLANELTKER EQNSVCEMNN 1260 ESRSEPEFSE RKCKTFIEYF RDTFVSTATP LKYCISIFST HISKYCISEH IFSDMVSLIL 1320 LVDSFEMLLF ECNVHSEALE GLFSCSEVGA ASELYMVHSI PLFIQRRECL AALRALQCSL 1380 SELELPDFRD ESDLMDLCFQ SASLVLCTAS SSFKLHRAEI SFTIVVIDEA AQLKECESTI 1440 PLQLPGVRHV VLVGDECQLL AMVKSNVSRE SGFARSLFDR LSSMGHPKHL LDMQYRMQPS 1500 ISCFPNSCFY NNRILDAPNV TQKSHEKHHL PGPMFGPYSF INVNDGREDK DENGHSRKNI 1560 VEVSIVLKVL RNLYKGTLDF CFILARSHIP DVGYISQQYF SKMPDGSDKF LKSFKKLKSA 1620 SVKKSALNLL LKLSSGWRPN KRSVETSCGS SSIILKKFKV KYLYIVCTTD IAEDVRYVQV 1680 LKVWDILPLE DIPKLVYRLE TILNRYTDAF INLCKEKYFE GNLEVPQALE FSRFKDPSVT 1740 ETKGDFFSDT SDSRSYVENS QVSESLLLMK FYSLSSGVVN HLLSDREGRE LDLPFEVTDQ 1800 EMEIIIQHRS SFIVGRSGTG KTTGLTMKLF QKEQWHHLAL QGCSVIENST AEQSSAATEG 1860 KVIRQLFVTV SPKLCFAIKQ HVTHLKRFAC GGSHSAQRSL IDMIDFDEEE SQFKDIQDSF 1920 HDIPPSYYPL VITFHKFLMM LDGTLSNSYF SRFQDASIPH DQLRNSRSVA FQAFFRTKEV 1980 NYEQFSSLYW PHFNTQLTKN LDAACVFTEI ISHIKGGLGA IEACDGKLSQ EDYVKLSEGR 2040 SSDITKPKRE QIYEIFQDYE KMKMGNGEFD MADFVIDLQR RLKHEKYVGD QMDFIYIDEV 2100 KDLTMSQLAL FKHMCNTVDE GFVFSGDTAQ TIARGTDFRF QDIRHLFYKN LCWSQELISM 2160 RIEKTKGQIS EVYHLTQNIH THAGILKLSQ SIIELIYRFF PFSIDVLKPE SSLIYGEAPV 2220 VLESGENENA IIKRFGNSGN IVGFGAEPDV KRTVRTRLKV WTSVRSPPSS AGDGAPPPQK 2280 TLAASPTTFP PRRVHSFPDV LLYNFFSSSP LRNQWRVIYD YMKEQDLLDS TLPKKFPSFN 2340 EAKHNILCSE LKQLYVAVTR TRQRLWVCET VHEHSKPMID YWKKKCLVQV RQLDDSLAQA 2400 MQVASSTEEW RSREIKLYHA NKYGMATLCF ERAGDTYWEQ RSKAAGLKAI ADRMRMSNPG 2460 EANSILKEAA EIFDAIGKAD SAARCFSDLG EYERAARIYF |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1112 | COG1112 | 3.0e-19 | 1402 | 1584 | 185 | + Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] | ||
| COG1874 | LacA | 9.0e-25 | 68 | 369 | 358 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam13087 | AAA_12 | 2.0e-25 | 1473 | 1589 | 119 | + AAA domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins. | ||
| pfam01301 | Glyco_hydro_35 | 3.0e-151 | 74 | 376 | 319 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 43 | 860 | 847 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003677 | DNA binding |
| GO:0004003 | ATP-dependent DNA helicase activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005524 | ATP binding |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 5.04467e-44 | 77 | 407 | 17 | 350 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 2e-37 | 77 | 363 | 12 | 314 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 2e-37 | 77 | 363 | 12 | 314 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8c_B | 2e-37 | 77 | 363 | 12 | 314 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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