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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna24568.1-v1.0-hybrid |
Family | CE8 |
Protein Properties | Length: 548 Molecular Weight: 60433.9 Isoelectric Point: 7.155 |
Chromosome | Chromosome/Scaffold: 1 Start: 12207487 End: 12209234 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 227 | 526 | 0 |
NVIVAQDGSGQFRTINEALRAYPKGNQGRFVIYVKQGVYKETVIIDKTMVNIYMYGDGPRATVVTGNKGEANTGDKISTSGTFQVYASGFIGRSMGFTNG AGPEARPAVALRTSGDMIGIFNCRISGYQDTLYMNIGRQFFRNCVISGHVDCIFGDARVVIQNSLIIVRKSSMKNQNQAFITAPGQQTGHEVGATVLHNC RIVPEEALFPTRFAVRTYLGRPWKTYARAAFIECTIADFIRPEGVIAWDGNDFNTQHSFFGEFKNRGPGANIANRVKWPKGGFTGEMDGNTAAKFTVDSM |
Full Sequence |
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Protein Sequence Length: 548 Download |
MVAKKVLISS IFLILIVGVV IGLVAVFVHN NAKKSGQESL SEQMKLVIQM CNYTDHHTEC 60 QQSLSPVAQN SSAGVKDYMK AALLSISDQA QNSLNMTESL LVEAKDGTRI KRSIEECNDL 120 MKEARDELQA LVSYVNDVEL ETMNDRALEL RIWIGSVNSY AGTCMDVIGD DDRKLNENAV 180 TENGSNSRRL MGEILEEDIP KDEYPSWMSR ADCKLMAKQD NGRIMPNVIV AQDGSGQFRT 240 INEALRAYPK GNQGRFVIYV KQGVYKETVI IDKTMVNIYM YGDGPRATVV TGNKGEANTG 300 DKISTSGTFQ VYASGFIGRS MGFTNGAGPE ARPAVALRTS GDMIGIFNCR ISGYQDTLYM 360 NIGRQFFRNC VISGHVDCIF GDARVVIQNS LIIVRKSSMK NQNQAFITAP GQQTGHEVGA 420 TVLHNCRIVP EEALFPTRFA VRTYLGRPWK TYARAAFIEC TIADFIRPEG VIAWDGNDFN 480 TQHSFFGEFK NRGPGANIAN RVKWPKGGFT GEMDGNTAAK FTVDSMLLPD TWLKMATIPY 540 LPSFAHA* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 2.0e-99 | 30 | 544 | 540 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02990 | PLN02990 | 5.0e-107 | 30 | 544 | 544 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02197 | PLN02197 | 5.0e-110 | 34 | 539 | 575 | + pectinesterase | ||
pfam01095 | Pectinesterase | 5.0e-127 | 227 | 530 | 306 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 5.0e-136 | 29 | 539 | 550 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 224 | 541 | 1 | 312 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 220 | 540 | 1 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 3uw0_A | 1e-22 | 227 | 498 | 32 | 337 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 6e-21 | 227 | 499 | 5 | 314 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 6e-21 | 227 | 499 | 5 | 314 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |