Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna24598.1-v1.0-hybrid |
Family | GT47 |
Protein Properties | Length: 457 Molecular Weight: 52183.9 Isoelectric Point: 10.1506 |
Chromosome | Chromosome/Scaffold: Start: 2009776 End: 2011429 |
Description | Exostosin family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 101 | 400 | 0 |
KGLKVFVYDLPAKYNTNWLSNDRCRTHLFAAEVAIHRAILTSDFFTSDPSRADFFLVPVYVSCNFSTVNGFPAIGHARTLIASAVQLIRTRYPFWDRNQG SDHVFVATHDFGSCFHTMENVAIADGVPDFLKKSIVLQTFGVKHKHPCQEVENVVIPPYVSPESVRKSLENAPADGRRDIFAFFRGKMEVHPKNVSGRYY SKRVRTNIWRKYNGDRRFYLQRRRFMGYQSEIVRSVFCLCPLGWAPWSPRLVESVALGCVPVIIADGIRLPFDDVVPWAEISLTVAEKDVGKLGTILEHV |
Full Sequence |
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Protein Sequence Length: 457 Download |
MLEQNRAPKS RGFYVRMKLQ NSKHGRPQDK GSFYTYCKWV LWLSLTLYFF SSYLISNHPN 60 QNKPTTSLSK THFSTLPSRA LFESVIDNTT TALLKNKELF KGLKVFVYDL PAKYNTNWLS 120 NDRCRTHLFA AEVAIHRAIL TSDFFTSDPS RADFFLVPVY VSCNFSTVNG FPAIGHARTL 180 IASAVQLIRT RYPFWDRNQG SDHVFVATHD FGSCFHTMEN VAIADGVPDF LKKSIVLQTF 240 GVKHKHPCQE VENVVIPPYV SPESVRKSLE NAPADGRRDI FAFFRGKMEV HPKNVSGRYY 300 SKRVRTNIWR KYNGDRRFYL QRRRFMGYQS EIVRSVFCLC PLGWAPWSPR LVESVALGCV 360 PVIIADGIRL PFDDVVPWAE ISLTVAEKDV GKLGTILEHV ASTNLSAIQK NIWDPRVRRA 420 LLFHDRIQPG DATWQVLSAL ENKLARSYRR GSVSSE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 7.0e-74 | 101 | 397 | 305 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Sequence Alignments (This image is cropped. Click for full image.) |
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