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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna25092.1-v1.0-hybrid |
Family | GH14 |
Protein Properties | Length: 497 Molecular Weight: 55868.5 Isoelectric Point: 6.7395 |
Chromosome | Chromosome/Scaffold: 5 Start: 6254268 End: 6256242 |
Description | chloroplast beta-amylase |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 61 | 448 | 0 |
YVTLPLDDLGGEADPVGTVGRREFTAESIGVLAEAGVEGVVMDVWWALVEREPRVYHWEAFLEMAEMVQRSGLKIRVVLAFHSERDWPTWPKTVDLPLWI LEEFQKNRGLGYKNRYGCSGEEYISLGCDTLPVLRGRSPLETYADFMRSFRDNFRPFLGHVITGIQVGMGSDGELKYPSANIHELVIGRTGEFNCYDKYM VASLQEYARELGMPEWGDVCRLSEPLQFAGIKGNGNDDSWNTPYGAFLLEWYSGMLLMHGERICEQAEAIFSGTNVTMSGKLGGYYYHYLHPSHISELTA GYYNTSTRDGYLPFARMFARHGFTLCCSSFDLKDETERYCTSSPEGLLKQILSAARLCGIPVEGESSDPCYNGRLTSLKQVVKMSKNY |
Full Sequence |
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Protein Sequence Length: 497 Download |
MSTTIALPHA PSTLTQCPSI FRAKPHPIIH HPRFMTTCSA VGSRQLKLSS EQSSSLSSPV 60 YVTLPLDDLG GEADPVGTVG RREFTAESIG VLAEAGVEGV VMDVWWALVE REPRVYHWEA 120 FLEMAEMVQR SGLKIRVVLA FHSERDWPTW PKTVDLPLWI LEEFQKNRGL GYKNRYGCSG 180 EEYISLGCDT LPVLRGRSPL ETYADFMRSF RDNFRPFLGH VITGIQVGMG SDGELKYPSA 240 NIHELVIGRT GEFNCYDKYM VASLQEYARE LGMPEWGDVC RLSEPLQFAG IKGNGNDDSW 300 NTPYGAFLLE WYSGMLLMHG ERICEQAEAI FSGTNVTMSG KLGGYYYHYL HPSHISELTA 360 GYYNTSTRDG YLPFARMFAR HGFTLCCSSF DLKDETERYC TSSPEGLLKQ ILSAARLCGI 420 PVEGESSDPC YNGRLTSLKQ VVKMSKNYLS GLENPSFSFK LRADKFKSFK SPKYLLEKHS 480 RATFTDFVRR MSNLND* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 2.0e-60 | 59 | 491 | 452 | + beta-amylase | ||
PLN02161 | PLN02161 | 4.0e-73 | 59 | 428 | 393 | + beta-amylase | ||
PLN02801 | PLN02801 | 1.0e-77 | 59 | 491 | 444 | + beta-amylase | ||
PLN00197 | PLN00197 | 4.0e-102 | 59 | 496 | 450 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 3.0e-113 | 59 | 492 | 445 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fa2_A | 0 | 60 | 491 | 15 | 443 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
PDB | 2xgi_A | 0 | 60 | 491 | 12 | 439 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
PDB | 2xgb_A | 0 | 60 | 491 | 12 | 439 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
PDB | 2xg9_A | 0 | 60 | 491 | 12 | 439 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
PDB | 2xfy_A | 0 | 60 | 491 | 12 | 439 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
Sequence Alignments (This image is cropped. Click for full image.) |
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