y
Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna25126.1-v1.0-hybrid |
Family | GH9 |
Protein Properties | Length: 614 Molecular Weight: 68150.4 Isoelectric Point: 5.5398 |
Chromosome | Chromosome/Scaffold: 5 Start: 6452960 End: 6455353 |
Description | Six-hairpin glycosidases superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 116 | 578 | 0 |
ALNQALTFFDAQKSGTYPQNSPVKFRGDSGLQDGNSTGNHVNLVGGFYDSGNNIKFSFSTAYTMTLLSWTVIEYHQKYADIGELDHVKDIIKWGSDYLLK IGNANSDGTTPSDINCWERPEDMDYVRPVSICDSTASDLAGEIVAALSAASLVFKSDDSVYSGELVKAAGELFESATKDPNNQGTYTRDESCGGQSRDFY NSSGYNDELVWGGTWLFFATGDISYLQYATDLFQAAVDSETSSDKWIFDWNNKLTANMVLLTRLQFFHDLGYPYEGSLMTSANMTGSLMCSYVSSRIFNM TPGGLVIQRPNYGAPLQFAATASFLSKLYSDYLDLLLSSGGSCSTGEFTVDMLRNFSLSQASITYNVNYILGDNPMNMSYMVGFGDKFPSQVHHRSASIP WDGQHYLCKDGYKWRDSKDPNPNVLLGAMVGGPDEFDKFIDERDRQEFTEPRITSNAGLVAAL |
Full Sequence |
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Protein Sequence Length: 614 Download |
MPSSLGYQPP SADQEPVTYV HTLSEAGRLL PSASRWNSIE IDFNLVPQSG IAYDVLPSGY 60 SKSYDHNLVI RDRKLFKRCL YISASIVILF LALILLLRFL PHKHHHHGPS KNLTLALNQA 120 LTFFDAQKSG TYPQNSPVKF RGDSGLQDGN STGNHVNLVG GFYDSGNNIK FSFSTAYTMT 180 LLSWTVIEYH QKYADIGELD HVKDIIKWGS DYLLKIGNAN SDGTTPSDIN CWERPEDMDY 240 VRPVSICDST ASDLAGEIVA ALSAASLVFK SDDSVYSGEL VKAAGELFES ATKDPNNQGT 300 YTRDESCGGQ SRDFYNSSGY NDELVWGGTW LFFATGDISY LQYATDLFQA AVDSETSSDK 360 WIFDWNNKLT ANMVLLTRLQ FFHDLGYPYE GSLMTSANMT GSLMCSYVSS RIFNMTPGGL 420 VIQRPNYGAP LQFAATASFL SKLYSDYLDL LLSSGGSCST GEFTVDMLRN FSLSQASITY 480 NVNYILGDNP MNMSYMVGFG DKFPSQVHHR SASIPWDGQH YLCKDGYKWR DSKDPNPNVL 540 LGAMVGGPDE FDKFIDERDR QEFTEPRITS NAGLVAALIA LHDPPHTRKN KKKGHYDPTK 600 LGIDQMGIFD KIH* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00119 | PLN00119 | 1.0e-100 | 110 | 581 | 491 | + endoglucanase | ||
PLN02266 | PLN02266 | 3.0e-104 | 102 | 581 | 510 | + endoglucanase | ||
PLN02613 | PLN02613 | 6.0e-106 | 116 | 581 | 488 | + endoglucanase | ||
PLN02345 | PLN02345 | 1.0e-122 | 116 | 580 | 478 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 2.0e-124 | 112 | 578 | 476 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 117 | 581 | 9 | 428 | B Chain B, Gy9-Mamu-A02-Hb2m |
PDB | 1ksc_A | 0 | 117 | 581 | 9 | 428 | B Chain B, Gy9-Mamu-A02-Hb2m |
PDB | 1ks8_A | 0 | 117 | 581 | 9 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 109 | 581 | 2 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 109 | 581 | 2 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |