Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna25238.1-v1.0-hybrid |
Family | AA1 |
Protein Properties | Length: 580 Molecular Weight: 63953.5 Isoelectric Point: 9.6107 |
Chromosome | Chromosome/Scaffold: 2 Start: 4040119 End: 4042575 |
Description | laccase 11 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 29 | 550 | 0 |
ALKNYQFDIQVKNVSRLCHSKPIVTVNGMFPGPTIYAREGDTLLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNRYTYNMTITGQRGTL WWHAHIFWLRATVYGAIVILPKQGTAGFPFPQPYSETNLILGEWWNNDVEEVVKQGNKLGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVEQGKTYLLR IINAALNDELFFTIAGHNLTVVEIDAVYTKPFTTQAILIAPGQTTNVLVQANQVPSRYFMAARPFMDAPVSIDNKTATAILQYKGIPNSVLPVLSQLPAL NDTAFALSYGAKLKSLNTAKYPANVPLKVDRQLFYTIGLGINQCSTCLNGTQLTASLNNITFVMPKIGLLQAHYFNTKGVFTTDFPDRPPTPFNYTGAPL TANLGTKLGTKLSKIAFNSTVELVLQDTNLLTVESHPFHLHGYNFFVVGTGVGNFDPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFRADNPGVWFMHCH LELHTSWGLKTAFVVENGKGAD |
Full Sequence |
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Protein Sequence Length: 580 Download |
MTRSNNFCRA SLLLFSCVVG FFFIPAKAAL KNYQFDIQVK NVSRLCHSKP IVTVNGMFPG 60 PTIYAREGDT LLVNVTNHAQ YNMSIHWHGL KQYRNGWADG PAYITQCPIK TGNRYTYNMT 120 ITGQRGTLWW HAHIFWLRAT VYGAIVILPK QGTAGFPFPQ PYSETNLILG EWWNNDVEEV 180 VKQGNKLGLP PNMSDAHTIN GKPGPLFPCS EKHTFAMEVE QGKTYLLRII NAALNDELFF 240 TIAGHNLTVV EIDAVYTKPF TTQAILIAPG QTTNVLVQAN QVPSRYFMAA RPFMDAPVSI 300 DNKTATAILQ YKGIPNSVLP VLSQLPALND TAFALSYGAK LKSLNTAKYP ANVPLKVDRQ 360 LFYTIGLGIN QCSTCLNGTQ LTASLNNITF VMPKIGLLQA HYFNTKGVFT TDFPDRPPTP 420 FNYTGAPLTA NLGTKLGTKL SKIAFNSTVE LVLQDTNLLT VESHPFHLHG YNFFVVGTGV 480 GNFDPKKDPA KFNLVDPPER NTVGVPTGGW AAIRFRADNP GVWFMHCHLE LHTSWGLKTA 540 FVVENGKGAD KSVLPPPADL PPSRHPKMQS SANIHSKKS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02191 | PLN02191 | 1.0e-74 | 18 | 542 | 565 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 3.0e-86 | 12 | 541 | 564 | + oxidoreductase | ||
TIGR03388 | ascorbase | 7.0e-97 | 31 | 541 | 557 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 28 | 562 | 539 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 28 | 542 | 1 | 522 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1asq_A | 0 | 28 | 542 | 1 | 522 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1asp_B | 0 | 28 | 542 | 1 | 522 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |