| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna25266.1-v1.0-hybrid |
| Family | AA1 |
| Protein Properties | Length: 385 Molecular Weight: 42921.8 Isoelectric Point: 9.5419 |
| Chromosome | Chromosome/Scaffold: 2 Start: 3788031 End: 3789683 |
| Description | laccase 11 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 28 | 373 | 0 |
| AAVKSYQFDIQVKNVSRLCHSKPIVTVNGMFPGPTVYAREGDTLLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGSSYIYNMTVTGQRGT LWWHAHIFWLRATVYGAIVVLPKQGTVFPFPRPYREANLILGEWWNNDVEEVVKQGNRLGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVEQRKTYLLR IINAALNDELFFAIAGHNLTVVEIDAVYTKPFTSQAILIAPGQTTNVLVQANQVPSRYFMAARPFMNAPVSIDNKTATAILQYKGIPNSVLPVLSQLPAL NDTAFALSYAAKLRSLNTPKYPANVPLKVDRQLFYTIGLGINQCTT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 385 Download |
| MAKTNNFGFC SLLPYLCFVA FLFIPAKAAV KSYQFDIQVK NVSRLCHSKP IVTVNGMFPG 60 PTVYAREGDT LLINVTNHAQ YNMSIHWHGL KQYRNGWADG PAYITQCPIK TGSSYIYNMT 120 VTGQRGTLWW HAHIFWLRAT VYGAIVVLPK QGTVFPFPRP YREANLILGE WWNNDVEEVV 180 KQGNRLGLPP NMSDAHTING KPGPLFPCSE KHTFAMEVEQ RKTYLLRIIN AALNDELFFA 240 IAGHNLTVVE IDAVYTKPFT SQAILIAPGQ TTNVLVQANQ VPSRYFMAAR PFMNAPVSID 300 NKTATAILQY KGIPNSVLPV LSQLPALNDT AFALSYAAKL RSLNTPKYPA NVPLKVDRQL 360 FYTIGLGINQ CTTCLNGMLE IKWT* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00394 | Cu-oxidase | 2.0e-43 | 166 | 312 | 151 | + Multicopper oxidase. Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. | ||
| PLN02604 | PLN02604 | 9.0e-45 | 12 | 341 | 362 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 2.0e-53 | 30 | 361 | 367 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| pfam07732 | Cu-oxidase_3 | 7.0e-54 | 36 | 152 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03389 | laccase | 0 | 28 | 377 | 354 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3v9c_A | 4e-39 | 42 | 323 | 15 | 293 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3fpx_A | 4e-39 | 42 | 323 | 15 | 293 | A Chain A, Native Fungus Laccase From Trametes Hirsuta |
| PDB | 3pxl_A | 4e-39 | 42 | 323 | 15 | 293 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
| PDB | 1asq_B | 1e-38 | 28 | 361 | 1 | 348 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
| PDB | 1asq_A | 1e-38 | 28 | 361 | 1 | 348 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
