| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna25563.1-v1.0-hybrid |
| Family | GH3 |
| Protein Properties | Length: 794 Molecular Weight: 86499 Isoelectric Point: 5.2979 |
| Chromosome | Chromosome/Scaffold: Start: 6514381 End: 6517326 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 71 | 323 | 0 |
| GITRLGVPKYGWWSEALHGVSNVGRGATRFNATVPGATSFPAVILSAASFNESLWLRMGQVVSTEARAMYNLGLAGLTYWSPNVNVFRDPRWGRAQETPG EDPLVVSNYAVNYVKGLQDVGESNATGDRLKVSSCCKHYTAYDVDNWKGVDRFHFDAQVTKQDMEDTYQPPFRSCVQEGHVSSVMCSYNRVNGIPTCADP DLLQGVVRGQWGLDGYIVSDCDSVEVYYDAIHYTQTPEDAVALALKAGLNMNC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 794 Download |
| MKNQVLLHLS LLLFLLIVPI VAQPFACDTK ASTSQFPFCN TSLPYEDRAK DLVSRLTLQE 60 KVQQLVDSST GITRLGVPKY GWWSEALHGV SNVGRGATRF NATVPGATSF PAVILSAASF 120 NESLWLRMGQ VVSTEARAMY NLGLAGLTYW SPNVNVFRDP RWGRAQETPG EDPLVVSNYA 180 VNYVKGLQDV GESNATGDRL KVSSCCKHYT AYDVDNWKGV DRFHFDAQVT KQDMEDTYQP 240 PFRSCVQEGH VSSVMCSYNR VNGIPTCADP DLLQGVVRGQ WGLDGYIVSD CDSVEVYYDA 300 IHYTQTPEDA VALALKAGLN MNCGDYLGKY TENAVNLKKV EESVVDQSLI YNYIVLMRLG 360 FFDGDPKLLE FGNLGVSDVC SDEHKALALD AAKQGIVLLD NNGALPLSPT TTKNLAIIGP 420 NANATEVMIS NYAGIPCSYT SPLQGLKKYV STAKYEPGCS SVKCADESLI EAAAQAVALA 480 DAVVLVMGLD QSIEAEGLDR VNLTLPGFQE KLVEQVVDAT NGTVILVIMS AGPIDVSFAK 540 NLSKVGGILW VGYPGQDGGD AIAQVIFGDY NPAGKSPFTW YPQEYVDQVP MTDMNMRANS 600 SRNYPGRTYR FYTGKTIYEF GHGLSYSTFS KFIMSAPSTL LIHSNSTTTF NSHNNIQILE 660 PVSSSAKEID ISSINCQSLA FDLVVGVTNK GPIDGSHVVL AFWRPPSSQG LIGAPNLQLV 720 GFERVEVKNR ETKSLTMRVD VCKGLNLVDS EGKRKLVTGL HTILVGSPSE QQVKHYLNVR 780 LPEQHELSYS SSH* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01915 | Glyco_hydro_3_C | 8.0e-53 | 396 | 628 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| COG1472 | BglX | 4.0e-54 | 71 | 447 | 384 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 2.0e-62 | 57 | 348 | 322 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 6.0e-65 | 34 | 741 | 793 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 25 | 781 | 762 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 108 | 778 | 91 | 734 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 3u48_A | 0 | 108 | 778 | 91 | 734 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 3u4a_B | 0 | 108 | 778 | 91 | 734 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 3u4a_A | 0 | 108 | 778 | 91 | 734 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 2x41_A | 6e-35 | 47 | 630 | 2 | 604 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
