Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna26047.1-v1.0-hybrid |
Family | GT37 |
Protein Properties | Length: 677 Molecular Weight: 76750.7 Isoelectric Point: 7.9911 |
Chromosome | Chromosome/Scaffold: 5 Start: 7261274 End: 7265679 |
Description | fucosyltransferase 1 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT37 | 191 | 644 | 0 |
LDDQISDHVEVPKDKMLGGLLAAGFDEGSCVSRYQSASYRKEMPHKPSSHLLSRLRRYEALHKRCGPNTESYNKAVEQLKSGRRLTSSDCNYVVWISYSG LGNRILTLASAFLYALLTNRVLLVDPGVDMVDLFCEPFPEASWFLPMDFPLKNQFDSLDQKSPHCYGEMVRKSNLTNSEQSLLSSFVYLHLSHDYNDQDK LFFCNQDQDFLEKIPWLIVRTDNYFVPSLFLIPSFEQELNSLFPRKETVFHFLGRYLFHPTNVVWGLITRYYQAYLANADERIGIQIRVFDTGTGPFQHV FDQIISCALKENLLPETNRQDLIVRPSGAAKSKAVLMTSLSSGYFEKLRDMYWEHPTVTGEVIGIYQPSHEEYQQTEKHTHNRKALAEMYLLSLTDVLIT SSWSTFGYVAQSLGGLTPWILYKPENRTAPDPACKRAMSMEPCFHAPPFYDCKA |
Full Sequence |
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Protein Sequence Length: 677 Download |
MALPQPKTGL FVGLNKGHVT TKKELAPRPF DRKGKTSKRV HFVRNLIREC SQLKLLRHNS 60 TLFLKSDSEL HFKTFPTMCI SRVQKPASGQ ATPGSRHYPD DDPHRMKRFS KTLNGDDPSN 120 NSDSGTRNAL KDPDRNAGLS PMRVMGIFIA CLILFSVLFS VSVVLRDPPS NAAVHEALKA 180 GVLEVEPRKS LDDQISDHVE VPKDKMLGGL LAAGFDEGSC VSRYQSASYR KEMPHKPSSH 240 LLSRLRRYEA LHKRCGPNTE SYNKAVEQLK SGRRLTSSDC NYVVWISYSG LGNRILTLAS 300 AFLYALLTNR VLLVDPGVDM VDLFCEPFPE ASWFLPMDFP LKNQFDSLDQ KSPHCYGEMV 360 RKSNLTNSEQ SLLSSFVYLH LSHDYNDQDK LFFCNQDQDF LEKIPWLIVR TDNYFVPSLF 420 LIPSFEQELN SLFPRKETVF HFLGRYLFHP TNVVWGLITR YYQAYLANAD ERIGIQIRVF 480 DTGTGPFQHV FDQIISCALK ENLLPETNRQ DLIVRPSGAA KSKAVLMTSL SSGYFEKLRD 540 MYWEHPTVTG EVIGIYQPSH EEYQQTEKHT HNRKALAEMY LLSLTDVLIT SSWSTFGYVA 600 QSLGGLTPWI LYKPENRTAP DPACKRAMSM EPCFHAPPFY DCKAKTGVDT GELVPHVRHC 660 EDMSWGLKLI DPSDEL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5051 | RPL36A | 1.0e-6 | 7 | 53 | 47 | + Ribosomal protein L36E [Translation, ribosomal structure and biogenesis] | ||
cd11548 | NodZ_like | 3.0e-10 | 289 | 605 | 330 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
PTZ00196 | PTZ00196 | 1.0e-12 | 6 | 51 | 46 | + 60S ribosomal protein L36; Provisional | ||
pfam01158 | Ribosomal_L36e | 5.0e-17 | 9 | 51 | 43 | + Ribosomal protein L36e. | ||
pfam03254 | XG_FTase | 0 | 188 | 644 | 458 | + Xyloglucan fucosyltransferase. Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. |
Gene Ontology | |
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GO Term | Description |
GO:0003735 | structural constituent of ribosome |
GO:0005622 | intracellular |
GO:0005840 | ribosome |
GO:0006412 | translation |
GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3izr_k | 4e-19 | 1 | 65 | 1 | 65 | PP Chain p, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome |
PDB | 4b6a_i | 0.00005 | 7 | 53 | 4 | 50 | TT Chain t, Cryo-Em Structure Of The 60s Ribosomal Subunit In Complex With Arx1 And Rei1 |
PDB | 3u5i_i | 0.00005 | 7 | 53 | 4 | 50 | SS Chain s, The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Proteins Of The 60s Subunit, Ribosome B |
PDB | 3u5e_i | 0.00005 | 7 | 53 | 4 | 50 | D Chain D, The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Proteins Of The 60s Subunit, Ribosome A |
PDB | 3izs_k | 0.00005 | 7 | 53 | 4 | 50 | PP Chain p, Localization Of The Large Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome |