Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna26605.1-v1.0-hybrid |
Family | CBM43 |
Protein Properties | Length: 173 Molecular Weight: 18733 Isoelectric Point: 7.9827 |
Chromosome | Chromosome/Scaffold: 7 Start: 15689304 End: 15690165 |
Description | glycosyl hydrolase family 17 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 89 | 168 | 1.1e-31 |
WCVAKPHSDTDTLDKHLDWLCGMVECQAIKPGGACYDESIRAQASFAMNSYYQTKGRNDNNCDFSGTAVITTVDPSHGPC |
Full Sequence |
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Protein Sequence Length: 173 Download |
MSTERDLKTR ASFAMNAFYN LYRSLGGTCD FSGSGQIINT DPSTFSCKFV ASDGDSGSKL 60 PPRNVYNPKP IPKTPKRSVL GGDGPVRKWC VAKPHSDTDT LDKHLDWLCG MVECQAIKPG 120 GACYDESIRA QASFAMNSYY QTKGRNDNNC DFSGTAVITT VDPSHGPCHY LS* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 0.0002 | 8 | 35 | 28 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-12 | 6 | 49 | 44 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam07983 | X8 | 4.0e-19 | 88 | 157 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-31 | 88 | 170 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 7e-20 | 89 | 172 | 13 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
Sequence Alignments (This image is cropped. Click for full image.) |
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