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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna26782.1-v1.0-hybrid |
Family | GT48 |
Protein Properties | Length: 1994 Molecular Weight: 230288 Isoelectric Point: 9.9419 |
Chromosome | Chromosome/Scaffold: 7 Start: 5301126 End: 5317854 |
Description | glucan synthase-like 3 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT48 | 1292 | 1844 | 0 |
KAESYPSLRVAYIDEVEKTSEDKSKKMVRKVYYSALVKAAPPTKSIDSSDPVQRLDQDIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNY LEEAFKMRNLLEEFLRKHDGRPPTILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRLLASPLRVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIF AGILIALKLFKCNFRLTLYQFAKICAVQISIFEAKIANGNGEQTLSRDIYRLGHRFDFFRMLSCYFTTIGFYFSTLLTVLTVYVFLYGRLYLVMSGLEKG LSTQRAIRDNKPLQVALASQSVVQIGFLMALPMIMEIGLEKGFRTALSDFILMQLQLAPVFFTFSLGTKTHYYGKTLLHGGAEYRGTGRSFVVFHAKFAD NYRLYSRSHFVKGIELLILLVVYHIFGRSYRSGVVYILITVQIWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWKKWISNHGGIGVSPEKSWESWWEKEH EHLRYSGMRGIITEILLALRFFVYQFGLVYHLNITKDKSILVYGVSWLVIIGV |
Full Sequence |
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Protein Sequence Length: 1994 Download |
MAYRRGFDQQ QPQRRILRTQ TAGSFGEPML DSEVVPSSLV DIAPILRVAN EVESRNARVA 60 YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENET TLAGRAKSDA REMQSFYRDY 120 YKKYIQALQN AADKADRAQL TKAYQTAAVL FEVLKAVNQT EAVEVAEEMK YIFFILEAHT 180 KVEEKQQIYL PYNILPLDPD SKNQAIMSYP EIIATVYALR NTRGLPWPKD YKKKVDEDIL 240 DWLQAMFGFQ KDNVANQREH LILLVANVHV RQLPKPDQQP KLDDRALTIV MKKLFKNYKK 300 WCKYLGRKSS LWLPTIQQEV QQRKLLYMGL YLLIWGEAAN LRFMPECLCY IYHHMAFELY 360 GMLAGSVSPM TGEHIKPAYG GEEEAFLGKV VTPIYNTIAQ EAERSKGGKS KHSQWRNYDD 420 LNEYFWSVDC FKLGWPMRAD ANFFYQPSKE PELDKEKKNK PYTGHRWIGK VNFVEIRSFW 480 HIFRSFDRMW SFYILSLQAM IIVAWNGSGK LSSVFEGDVF KKVLSIFITA AMLKLAQAVL 540 DLILSWKARR SMSVFVRLRY VLKAVSAAAW VIVLPVTYAY SWKNPGGFAQ TIRGWFGNGP 600 TSSSLFILAI VIYLSPNMLS ALLFMFPFIR RYLERSNFKI MMLMMWWSQP RLYVGRGMHE 660 SAFSLFKYTL FWVLLLVSKL SFSYFVEIRP LVKPTKDIMR VHISTYEWHE FFPRAKNNIG 720 VVIALWAPIV LVYFMDTQIW YAIFSTIYGG IYGAFRRLGE IRTLELLRSR FESLPRAFNA 780 SLIPEEKNET KKKGLKATFS RKFDKIPSNK EKEAAKFAQM WNEIISSFRE EDLISDREMN 840 LLLVPYWADP DLNIIQWPPF LLASKIPIAL DMAKDSKGKD SELKKRMNTE KDNYMCCAVR 900 ECYLSFRSII NVLVLGEREK MVINEIFSIV DDHIEKGTLT KEVKLSALPS LHEQFVKLIE 960 YLLDNKKEDK DQVVIVLLNM LEVVTRDLID DEIPSLLDSN HGGSYGKDEG MRPLDQRDTY 1020 FGSLKFPVTP LTEAWKEKIR RLHLLLTEKE SAMDVPSNLE ARRRMSFFSN SLFMDMPPAP 1080 KVRNMLSFSG SKEDARTALK VRTSLRSPSY GSDDGVPPPQ RPPTASPITI PPRRVRRIPV 1140 FRRDHPKLQP KSISSENWNL VDSPGRKNDR GRCWRLLGWR RRVVGAVRWR TEARPHFKGV 1200 RTSASDPDYE WTNFLERVKC GTEDELRANE DLEEKLRLWA SYRGQTLTKT VRGMMYYRKA 1260 LELQAFLDMA KDEDLMEGYK AAESTIEEHH SKAESYPSLR VAYIDEVEKT SEDKSKKMVR 1320 KVYYSALVKA APPTKSIDSS DPVQRLDQDI YRIKLPGPAI LGEGKPENQN HAIIFTRGEG 1380 LQTIDMNQDN YLEEAFKMRN LLEEFLRKHD GRPPTILGLR EHIFTGSVSS LAWFMSNQET 1440 SFVTIGQRLL ASPLRVRFHY GHPDVFDRLF HLTRGGVSKA SKVINLSEDI FAGILIALKL 1500 FKCNFRLTLY QFAKICAVQI SIFEAKIANG NGEQTLSRDI YRLGHRFDFF RMLSCYFTTI 1560 GFYFSTLLTV LTVYVFLYGR LYLVMSGLEK GLSTQRAIRD NKPLQVALAS QSVVQIGFLM 1620 ALPMIMEIGL EKGFRTALSD FILMQLQLAP VFFTFSLGTK THYYGKTLLH GGAEYRGTGR 1680 SFVVFHAKFA DNYRLYSRSH FVKGIELLIL LVVYHIFGRS YRSGVVYILI TVQIWFMVGT 1740 WLFAPFLFNP SGFEWQKIVD DWTDWKKWIS NHGGIGVSPE KSWESWWEKE HEHLRYSGMR 1800 GIITEILLAL RFFVYQFGLV YHLNITKDKS ILVYGVSWLV IIGVLSLMKA VSAGRRRLSA 1860 DFQLLFRLVK GCMFITLLSV FVILVVLTHM TLKDVVVCIL AFMPTGWGML LIAQACKKPI 1920 KRAGFWQSIQ TLARGYEVIM GLLLFTPVAF LAWFPFVSEF QTRMLFNQAF SRGLQISRIL 1980 GGPRKGPKAS NSE* 2040 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3949 | COG3949 | 0.008 | 1723 | 1929 | 218 | + Uncharacterized membrane protein [Function unknown] | ||
pfam02364 | Glucan_synthase | 4.0e-7 | 1055 | 1089 | 35 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
pfam04652 | DUF605 | 1.0e-11 | 41 | 171 | 142 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
pfam14288 | FKS1_dom1 | 1.0e-56 | 322 | 438 | 118 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
pfam02364 | Glucan_synthase | 1.0e-144 | 1237 | 1825 | 666 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
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GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |