| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna27319.1-v1.0-hybrid |
| Family | CBM57 |
| Protein Properties | Length: 700 Molecular Weight: 76431 Isoelectric Point: 4.7227 |
| Chromosome | Chromosome/Scaffold: 3 Start: 24326723 End: 24333345 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 241 | 393 | 1.9e-26 |
| EGNQYELDLGTEGPSDFMSSSEKWGYSSTGVYMGKNDADYSATNTFLLNVNGPEFYQTARLAPLSLKYYGLCMLKGSYKVQLHFAEIMYTDNETFTGLGK RIFDVSIQGNLVLEDFNIMKEAGGAGKGIVREFDVLVNGSTLEIHLYWKGKGT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 700 Download |
| MKGLNLTGIL PEEFGNLTHL QELDLTRNYI NGSLPAGISR APLRILSLLG NRLSGSIPKE 60 IGDIATLTQL VLEDNQLEGP LPQNLGSLSS LSRLLLSANN FTGTVPESFG NLKNLTDFRI 120 DGSQISGKIP TFIGNWTKLD RLSGTLMEGP IPSTISLLTV LTELRISDLT GSSMRFPNLE 180 DLKSLERVIL RNCSITGSIP GYIGELTDLK LLDLSFNKLT GEVPTTLQNL VGLDYIKMEY 240 EGNQYELDLG TEGPSDFMSS SEKWGYSSTG VYMGKNDADY SATNTFLLNV NGPEFYQTAR 300 LAPLSLKYYG LCMLKGSYKV QLHFAEIMYT DNETFTGLGK RIFDVSIQGN LVLEDFNIMK 360 EAGGAGKGIV REFDVLVNGS TLEIHLYWKG KGTTAIPDRG VYGPLISAIT VTPNFKVDIG 420 GGGLSAGAIA GIVVASIVAI IMILAFLRYM GYLGGKDLED KELRGLELQT GYFTLRQIKA 480 ATGNFDPANK IGEGGFGPVY KVWTTSSIAN WFWIGYMAPE YAMRGYLTDK ADVYSFGIVA 540 LEIVSGKSNT NYRPKEEYVY LLDGAYVLQE QGNMLELVDL DLGSNYNKEE ALSMLNLALL 600 CTNPSPTLRP PMSSVVSMLE GKTPIQAPLS KRGSKEEDAR FKAFERLSQD SQTHVSTFSQ 660 DSHVRGTSME GPWIDSSVSL ASKDESNEHS STSHYDVTL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 1.0e-21 | 5 | 262 | 267 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 3.0e-22 | 6 | 234 | 241 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 3.0e-24 | 1 | 230 | 239 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 5.0e-26 | 6 | 227 | 227 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 3.0e-48 | 241 | 409 | 171 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004672 | protein kinase activity |
| GO:0005515 | protein binding |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rj0_A | 3e-18 | 1 | 239 | 298 | 543 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 3rj0_A | 1e-16 | 6 | 238 | 403 | 684 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 3rj0_A | 5e-16 | 6 | 227 | 352 | 555 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 3rj0_A | 0.000000000000004 | 6 | 266 | 451 | 740 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 3rj0_A | 0.0000000000002 | 18 | 238 | 197 | 446 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
