Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna27328.1-v1.0-hybrid |
Family | CBM57 |
Protein Properties | Length: 1008 Molecular Weight: 110244 Isoelectric Point: 5.7854 |
Chromosome | Chromosome/Scaffold: 3 Start: 24377923 End: 24387186 |
Description | Leucine-rich repeat transmembrane protein kinase |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM57 | 399 | 564 | 5.5e-31 |
LNINCGGSGVTVDGTTYDEDITANGPSSYYMSSTNWVSSSTGYFPDDDSSTDHFTSSTNSSRLSMANAQLYMTARLSPISLTYYGFCLLNGNYTVNLHFA EIMFTNGPTYSSLGRRIFDVYIQGIRVLQDFNIADEAGGAGKAVIKNYTAAVTTNTLEIRFFWAGK |
Full Sequence |
---|
Protein Sequence Length: 1008 Download |
MKNCKLLIHR LLVHSLLLLC FAALAFGANR LSADEVQALK DIAKTLGKTN WNFSADPCSG 60 EYGWITQADK YNANNVTCGH CTTSDAANAT GTTDQICHVV SILLRAQNLP GTLPSEMARL 120 PYLQQIDLAR NYLNGTIPPE WGSLPLVNIS LVGNRLTGSI PVELANITTL KSLTIDFNNF 180 SGGLPWELGF LPSIETLVLT SNNFTGELPD TFAKLTKLKD FRIIDNSLSG KIPDYIQNWT 240 NIKKLGIQAS GLTGPIPSGI SLLTSLTDLR ITDLNGPESS FPRLENMKNL KILILRSCYI 300 NGQLPEYFSD MTELTTLDLS FNKLTGKVPR SFVAPTNNLD YIFLTGNLLN GPEPLWMVGE 360 NVDLSYNNFT ITPGPVNCQP QAGWNLFAGS SEGNSWYTLN INCGGSGVTV DGTTYDEDIT 420 ANGPSSYYMS STNWVSSSTG YFPDDDSSTD HFTSSTNSSR LSMANAQLYM TARLSPISLT 480 YYGFCLLNGN YTVNLHFAEI MFTNGPTYSS LGRRIFDVYI QGIRVLQDFN IADEAGGAGK 540 AVIKNYTAAV TTNTLEIRFF WAGKGTTGIP VRGVYGPLIS AISVVPDFEP PAEISSGHIS 600 KSISIGAVVG IMAAGAVFLV LLVFAYLWWR GYLRRERTLE QDLKGVDLQT GKFSLRQIKD 660 ATKNFDISNK IGEGGFGPVY KGQLSDGTII AVKQLSAKSK QGNREFVNEI GMISALQHPH 720 LVKLYGCCIE GNQLLLVYEY MENNSVGRAL FGAKESQLKL DWPTRHKICV GIAKGLAYLH 780 EESRLKIVHR DIKATNVLLD KNLDPKISDF GLAKLDEDDS THISTRIAGT YGYMAPEYAM 840 RGYLTDKADV YSFGILVLEM VSGRCNTTYR SKEESFYILD WALLLQEKAS LLDLVDPRLG 900 CDFNKEEVMI TINVALLCCN ITAALRPAMS LVVSMLEGRA RVADLVLDSS ASSQEIGEMR 960 KHFGSSYSLE TTGGSTENDV HGRGVHGSDI SSGALSNQSS FKLLEEQ* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00220 | S_TKc | 5.0e-48 | 665 | 864 | 202 | + Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily. | ||
smart00221 | STYKc | 8.0e-49 | 667 | 862 | 202 | + Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. | ||
smart00219 | TyrKc | 2.0e-50 | 667 | 862 | 202 | + Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily. | ||
cd00180 | PKc | 2.0e-51 | 671 | 860 | 194 | + Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. | ||
pfam11721 | Malectin | 2.0e-59 | 397 | 582 | 190 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004672 | protein kinase activity |
GO:0005515 | protein binding |
GO:0005524 | ATP binding |
GO:0006468 | protein phosphorylation |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ulz_A | 0 | 649 | 938 | 16 | 308 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3uim_A | 0 | 649 | 938 | 16 | 308 | A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation |
PDB | 3tl8_H | 0 | 649 | 938 | 24 | 316 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3tl8_G | 0 | 649 | 938 | 24 | 316 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3tl8_D | 0 | 649 | 938 | 24 | 316 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |