Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna27505.1-v1.0-hybrid |
Family | GT47 |
Protein Properties | Length: 478 Molecular Weight: 53549.6 Isoelectric Point: 9.1171 |
Chromosome | Chromosome/Scaffold: 2 Start: 955263 End: 957207 |
Description | Exostosin family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 50 | 402 | 0 |
HDSIKVYVADLPRSLNYGLLHTYWASGPDSRLPTDADHQAPTTPLPRSLQFPPYPENPLIKQYSAEYWILGDLMTPPHQRTGSFARRIFNAQDADVVFVP FFATLSAELQLATAKGVFRKKDGNEDYARQRQVVDLVKNTEAWKRSGGRDHVFVLTAFLADPVAMWHVRAELAPAVLLVVDFGGWYRLESKLSNDNSSDV IQHTQVSVLKDVIVPYTHLLPRLQLSENKKRTTLLYFKGAKHRHRGGLVREKLWDLLANVPNIIMEEGFPNATGREQSIKGMRTSEFCLHPAGDTPTSCR LFDAIQSLCIPVIISDNIELPFEGMIDYLEFSVFIAVSDASRPNWLLSHLKSI |
Full Sequence |
---|
Protein Sequence Length: 478 Download |
MALKTTSISL CSVPALFFAF TLLCTLSLSL FFLSNPPPPS PSPSSSISQH DSIKVYVADL 60 PRSLNYGLLH TYWASGPDSR LPTDADHQAP TTPLPRSLQF PPYPENPLIK QYSAEYWILG 120 DLMTPPHQRT GSFARRIFNA QDADVVFVPF FATLSAELQL ATAKGVFRKK DGNEDYARQR 180 QVVDLVKNTE AWKRSGGRDH VFVLTAFLAD PVAMWHVRAE LAPAVLLVVD FGGWYRLESK 240 LSNDNSSDVI QHTQVSVLKD VIVPYTHLLP RLQLSENKKR TTLLYFKGAK HRHRGGLVRE 300 KLWDLLANVP NIIMEEGFPN ATGREQSIKG MRTSEFCLHP AGDTPTSCRL FDAIQSLCIP 360 VIISDNIELP FEGMIDYLEF SVFIAVSDAS RPNWLLSHLK SISKAERDKF RQKMAQLQPV 420 FQYDNGHPGG IGPISPDGAV NHIWRKVDQK LPLIKEAILR ERRKPTGVSV PRRCHCT* 480 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-59 | 49 | 402 | 363 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016020 | membrane |