| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna27523.1-v1.0-hybrid |
| Family | AA1 |
| Protein Properties | Length: 653 Molecular Weight: 71713.2 Isoelectric Point: 7.6266 |
| Chromosome | Chromosome/Scaffold: 2 Start: 1096349 End: 1104251 |
| Description | laccase 14 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 24 | 551 | 0 |
| ANVHHYSFILKETNFTRLCFTKPMLTVNESFPGPTIHVRKGDTAFVNVLNNGKYGVTIHWHGVKQPRNPWSDGPENITQCPIQPGKNFTYEIIFSDEEGT LWWHAHSDWSRATVHGHIVILPEIGKTYPFPEPYSQQTIFLGEWFDTDLKELIDEATATGSDPDPSTGFTINGWPGALYNCSNETIYTLGVKYGKTYLLR LVNGVMNEEMFFGIAGHNITVVAQDASYIKPIVTSYIMITPGQTMDILLTANQTPSYYYMAASPFFDSGAPFDNTTTTAILRYTNVTSAPSTIPMPSLPF VTDKEGADNFTTQLRALASKKHPISVPKNITERILITVSVNQLPCEANVTCGGPNGNRLAASLNNISFTTPTTDILQAYYRNLNGVYKDDFPNQPPVYFN FTGVDTDVYLLPDVGTKVKVIEYGASVEIVYQGTNVGNAENHPMHLHGYSFYVVGSAYGNWNKTTSPATYNLVDPPLVNTVGVPKNGWAAIRFVANNPGV WFMHCHLERHTSWGMNSVVIVKNGRTTQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 653 Download |
| MGCRILVFFL GTFFLDGLLL SMAANVHHYS FILKETNFTR LCFTKPMLTV NESFPGPTIH 60 VRKGDTAFVN VLNNGKYGVT IHWHGVKQPR NPWSDGPENI TQCPIQPGKN FTYEIIFSDE 120 EGTLWWHAHS DWSRATVHGH IVILPEIGKT YPFPEPYSQQ TIFLGEWFDT DLKELIDEAT 180 ATGSDPDPST GFTINGWPGA LYNCSNETIY TLGVKYGKTY LLRLVNGVMN EEMFFGIAGH 240 NITVVAQDAS YIKPIVTSYI MITPGQTMDI LLTANQTPSY YYMAASPFFD SGAPFDNTTT 300 TAILRYTNVT SAPSTIPMPS LPFVTDKEGA DNFTTQLRAL ASKKHPISVP KNITERILIT 360 VSVNQLPCEA NVTCGGPNGN RLAASLNNIS FTTPTTDILQ AYYRNLNGVY KDDFPNQPPV 420 YFNFTGVDTD VYLLPDVGTK VKVIEYGASV EIVYQGTNVG NAENHPMHLH GYSFYVVGSA 480 YGNWNKTTSP ATYNLVDPPL VNTVGVPKNG WAAIRFVANN PGVWFMHCHL ERHTSWGMNS 540 VVIVKNGRTT QTSIRRPPPN LPICIRTSFR RTSTAADSSS VPDHFPSPVS PPNSSFPARS 600 PKTSNKVNLA GKLEFGGLAG DGKWSGKLLE SAGVEARPRR CRTVASGGTS AL* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02354 | PLN02354 | 1.0e-49 | 50 | 524 | 497 | + copper ion binding / oxidoreductase | ||
| PLN02191 | PLN02191 | 8.0e-64 | 21 | 543 | 565 | + L-ascorbate oxidase | ||
| TIGR03388 | ascorbase | 1.0e-82 | 42 | 541 | 535 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| PLN02604 | PLN02604 | 2.0e-83 | 24 | 541 | 556 | + oxidoreductase | ||
| TIGR03389 | laccase | 0 | 24 | 564 | 541 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 24 | 548 | 1 | 530 | A Chain A, Bacillus Subtilis Pectate Lyase |
| PDB | 1asq_A | 0 | 24 | 548 | 1 | 530 | A Chain A, Bacillus Subtilis Pectate Lyase |
| PDB | 1asp_B | 0 | 24 | 548 | 1 | 530 | A Chain A, Bacillus Subtilis Pectate Lyase |
| PDB | 1asp_A | 0 | 24 | 548 | 1 | 530 | A Chain A, Bacillus Subtilis Pectate Lyase |
| PDB | 1aso_B | 0 | 24 | 548 | 1 | 530 | A Chain A, Bacillus Subtilis Pectate Lyase |
