| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna27531.1-v1.0-hybrid |
| Family | AA1 |
| Protein Properties | Length: 545 Molecular Weight: 61310.4 Isoelectric Point: 4.6792 |
| Chromosome | Chromosome/Scaffold: 2 Start: 1143518 End: 1146520 |
| Description | laccase 14 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 33 | 535 | 0 |
| VHYYDFVVREKEFTKLCVTKSILVVNDSFPGPEIRVHKGDTVFVNVHNQGYYGFTIHWHGIKQPRNPWSDGPEYITQCPIAPGTNFTYEVQLSDEEGTLW WHAHSDWTRATVHGAIVILPAVGTTFPFPQQPDEDETTLIIASWYFGDIKELVDVAMEVGGDLPHSDAYTINGEPGDLCECSKETTYRRMVDYGKTYLLR IVNANINAEHFFAVGGHNLTVVGLDGAYIKPINTGYIVISPGQAMDVLLEANQAPGQYYMAARQYSSEDAAVVDFDHVNVTAILAYTGNYTYQPPLYPTT LPMYLDYPAAVEFILRIKSLATPEYPISVPLNVTTSMFIVVSMNELPCKHSGCKTDMEMTSSLNNISFAFPLNTTDVLQAYYRNISGVYTTDFPDQPTQY YNFTDETFEEDILFTVQGTKVKMLDYNETVQIVFQGTDVMKSSVNHPMHMHGYSFYVVGFGFGNHDNEIDPKGFNLVDPPQVVTFGVPKNGWLAIRFTAN NPG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 545 Download |
| MKPQKNRLLV TTEFLGFLFL IAQFTSLLVQ GDVHYYDFVV REKEFTKLCV TKSILVVNDS 60 FPGPEIRVHK GDTVFVNVHN QGYYGFTIHW HGIKQPRNPW SDGPEYITQC PIAPGTNFTY 120 EVQLSDEEGT LWWHAHSDWT RATVHGAIVI LPAVGTTFPF PQQPDEDETT LIIASWYFGD 180 IKELVDVAME VGGDLPHSDA YTINGEPGDL CECSKETTYR RMVDYGKTYL LRIVNANINA 240 EHFFAVGGHN LTVVGLDGAY IKPINTGYIV ISPGQAMDVL LEANQAPGQY YMAARQYSSE 300 DAAVVDFDHV NVTAILAYTG NYTYQPPLYP TTLPMYLDYP AAVEFILRIK SLATPEYPIS 360 VPLNVTTSMF IVVSMNELPC KHSGCKTDME MTSSLNNISF AFPLNTTDVL QAYYRNISGV 420 YTTDFPDQPT QYYNFTDETF EEDILFTVQG TKVKMLDYNE TVQIVFQGTD VMKSSVNHPM 480 HMHGYSFYVV GFGFGNHDNE IDPKGFNLVD PPQVVTFGVP KNGWLAIRFT ANNPGMPFPL 540 YFHF* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02354 | PLN02354 | 1.0e-34 | 15 | 294 | 289 | + copper ion binding / oxidoreductase | ||
| pfam07732 | Cu-oxidase_3 | 8.0e-49 | 39 | 152 | 116 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02604 | PLN02604 | 1.0e-52 | 14 | 535 | 554 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 9.0e-56 | 49 | 543 | 520 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 33 | 538 | 508 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 33 | 536 | 3 | 502 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
| PDB | 1asq_A | 0 | 33 | 536 | 3 | 502 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
| PDB | 1asp_B | 0 | 33 | 536 | 3 | 502 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
| PDB | 1asp_A | 0 | 33 | 536 | 3 | 502 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
| PDB | 1aso_B | 0 | 33 | 536 | 3 | 502 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
