Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna28696.1-v1.0-hybrid |
Family | GH16 |
Protein Properties | Length: 651 Molecular Weight: 73219.4 Isoelectric Point: 8.6111 |
Chromosome | Chromosome/Scaffold: 6 Start: 29729342 End: 29733915 |
Description | xyloglucan endotransglucosylase/hydrolase 16 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH16 | 400 | 563 | 1.5e-25 |
EGGQFLTLNLDKYSGSGFKSKKEYLFGRIDMQIKLVPGNSAGTVTTYYLSSEGPTHDEIDFEFLGNSSGNPYTLHTNVFSQGKGDREQQFHLWFDPTKAF HTYSFVWNSQRIIFLVDNIPIRVFNNLESFGVPFPKNQPMRVYSSLWNADDWATQGGRVKTDWT | |||
GH16 | 108 | 274 | 5.1e-26 |
KILEGGKSLTLNLDQYSGSGFKSKNEYLFGRIDMQIKLVPGNSAGTVTTYYLSSEGPTHDEIDFEFLGNSSGNPYTLHTNVFSQGKGDREQQFHLWFDPT KAFHTYSFVWNSQRIIFLVDNIPIRVFNNLESFGIPFPKNQPMRIYSSLWNADDWATQGGRVKTDWT |
Full Sequence |
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Protein Sequence Length: 651 Download |
MPPLTYMYDK DVAPSHDECN KIMHGRDTWL VNSHSVHNST YSINTIASSH HYSSHHLSVL 60 LATAIMSSSK VPMVLLLSLF ITSLLAMIAS AGNFLQDFDV TFGDQRVKIL EGGKSLTLNL 120 DQYSGSGFKS KNEYLFGRID MQIKLVPGNS AGTVTTYYLS SEGPTHDEID FEFLGNSSGN 180 PYTLHTNVFS QGKGDREQQF HLWFDPTKAF HTYSFVWNSQ RIIFLVDNIP IRVFNNLESF 240 GIPFPKNQPM RIYSSLWNAD DWATQGGRVK TDWTQAPFTA SYRNFKANAC VAGSSSSSSC 300 GVATTASTNS LTDQQSAWQT QTLDAAGRNR LRWVQHKFMV YNYCSDRKRF PQGVPAECKR 360 SRMLLLSLFI TSLLAMTASA GNFFQDFDIT FGDQRAKILE GGQFLTLNLD KYSGSGFKSK 420 KEYLFGRIDM QIKLVPGNSA GTVTTYYLSS EGPTHDEIDF EFLGNSSGNP YTLHTNVFSQ 480 GKGDREQQFH LWFDPTKAFH TYSFVWNSQR IIFLVDNIPI RVFNNLESFG VPFPKNQPMR 540 VYSSLWNADD WATQGGRVKT DWTQAPFYCF IPKPYKANAC VAGSSSSSCG VATTASTDST 600 QQGAWQTQTL DAAGRNRLRW VQQKFMVYNY CSDLKRFPQG LPVECKRSRF * 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00722 | Glyco_hydro_16 | 4.0e-76 | 94 | 274 | 183 | + Glycosyl hydrolases family 16. | ||
PLN03161 | PLN03161 | 9.0e-94 | 382 | 650 | 272 | + Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional | ||
PLN03161 | PLN03161 | 4.0e-98 | 93 | 358 | 270 | + Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional | ||
cd02176 | GH16_XET | 3.0e-138 | 378 | 645 | 272 | + Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16. Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling. | ||
cd02176 | GH16_XET | 9.0e-148 | 89 | 358 | 271 | + Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16. Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005618 | cell wall |
GO:0005975 | carbohydrate metabolic process |
GO:0006073 | cellular glucan metabolic process |
GO:0016762 | xyloglucan:xyloglucosyl transferase activity |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1un1_B | 0 | 94 | 362 | 17 | 276 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 1un1_B | 0 | 383 | 649 | 17 | 276 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 1un1_A | 0 | 94 | 362 | 17 | 276 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 1un1_A | 0 | 383 | 649 | 17 | 276 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 1umz_B | 0 | 94 | 362 | 17 | 276 | A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. |