Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna29049.1-v1.0-hybrid |
Family | GH47 |
Protein Properties | Length: 430 Molecular Weight: 48590.2 Isoelectric Point: 7.3041 |
Chromosome | Chromosome/Scaffold: 4 Start: 1020440 End: 1026763 |
Description | Glycosyl hydrolase family 47 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 75 | 282 | 0 |
MFYHAFNGYMDHAFPLDELKPQSCGGEDSLGGYALTLIDALDTLALLGDRDRFAASVEWISKNLQFDINKTVSVFETTIRVLGGLLSAHLIASDYATGMR IPTYDNQLLNLAEDLGRRLLPAFDTPSGIPFGSVNLRHGVDEHESKITSTAGGGTLTLEFGVLSRLTNDPIFEQVTKNAVRGLWAQRSKLNLVGAHINVF TGEWTQKN |
Full Sequence |
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Protein Sequence Length: 430 Download |
MPSLRRPTSA SILVSLLFLF LSVFLRPTLA DGVTPEEAKQ LRDTLLLQSP LKTKTQINLG 60 FSFNLVLLDF TAPEMFYHAF NGYMDHAFPL DELKPQSCGG EDSLGGYALT LIDALDTLAL 120 LGDRDRFAAS VEWISKNLQF DINKTVSVFE TTIRVLGGLL SAHLIASDYA TGMRIPTYDN 180 QLLNLAEDLG RRLLPAFDTP SGIPFGSVNL RHGVDEHESK ITSTAGGGTL TLEFGVLSRL 240 TNDPIFEQVT KNAVRGLWAQ RSKLNLVGAH INVFTGEWTQ KNPAKEDKCV PGHEEDVRRS 300 GRRRKFSPKM RRRSGRRRRR SRAERRLDLR KDEALISNFA SIGEVVELNG NNYRKWRDDA 360 EFYMGMHQNI DYCLLKPKPV GTEEENNMDA DSSWHYYEWF RTNIMAKNVI RRTMSEVVWG 420 SIEEPEDAI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 1.0e-29 | 74 | 279 | 216 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 7.0e-79 | 75 | 282 | 212 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fo3_A | 2e-32 | 74 | 280 | 16 | 213 | A Chain A, Crystal Structure Of Biosynthetic Arginine Decarboxylase Adc (Spea) From Escherichia Coli, Northeast Structural Genomics Consortium Target Er600 |
PDB | 1fo2_A | 2e-32 | 74 | 280 | 16 | 213 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1x9d_A | 2e-32 | 74 | 280 | 94 | 291 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1fmi_A | 2e-32 | 74 | 280 | 16 | 213 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 4ayr_A | 2e-31 | 76 | 284 | 21 | 220 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |