Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna29211.1-v1.0-hybrid |
Family | GT47 |
Protein Properties | Length: 573 Molecular Weight: 65491.4 Isoelectric Point: 9.1678 |
Chromosome | Chromosome/Scaffold: 5 Start: 18054783 End: 18056501 |
Description | Exostosin family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 146 | 493 | 0 |
SCSGRYIYMYDLPKRFNQDLLKNCHSLQRWTDMCPYMSNMGLGPKLTDISSKRRDRLLGSRGWFATNQFSLEVIFHNRMKKYKCLTNDSSLASAIFVPFY AGLNVGQYLWGYNASIRDASPLELVKWLSNRPEWKTMWGKDHFLVGGRIAWDFRRQTDSDSDWGSKLMFLPESKNMTLLSIESSSWSNEQAIPYPTYFHP TKESQVSEWQRRMRKLKRPYLFTFAGAPRPEYKENIRDMVISQCQSSTKHCKLVGCYHGATKCDDPLNVIKVFQSSVFCLQPSGDSFTRRSIFDSILAGC IPVFFHPGSAYVQYTWHFPTSPSEYSVFISENDIKEKKVLINETLLRI |
Full Sequence |
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Protein Sequence Length: 573 Download |
MEKTQWIAGG IKCRNQLWFV LTASFLIFIV LVCTDYSSLS SGRNFNRVTY YITNFTNVIV 60 TQDHHHPNSL PPLASTDSQI SDQTKGISYY TTTDTSTSTP APYSFGHGSQ PNYVTSSNET 120 QTASVTYVPP PQAIPNTKHQ ISDSDSCSGR YIYMYDLPKR FNQDLLKNCH SLQRWTDMCP 180 YMSNMGLGPK LTDISSKRRD RLLGSRGWFA TNQFSLEVIF HNRMKKYKCL TNDSSLASAI 240 FVPFYAGLNV GQYLWGYNAS IRDASPLELV KWLSNRPEWK TMWGKDHFLV GGRIAWDFRR 300 QTDSDSDWGS KLMFLPESKN MTLLSIESSS WSNEQAIPYP TYFHPTKESQ VSEWQRRMRK 360 LKRPYLFTFA GAPRPEYKEN IRDMVISQCQ SSTKHCKLVG CYHGATKCDD PLNVIKVFQS 420 SVFCLQPSGD SFTRRSIFDS ILAGCIPVFF HPGSAYVQYT WHFPTSPSEY SVFISENDIK 480 EKKVLINETL LRIPRQKVVA MREQVIRLIP RIIYADPRAS GLETLEDAFN IAVNGVLDKV 540 EKTRRDMEEG RDPGNAFSQL KATKFTRNEL PR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-67 | 146 | 493 | 362 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |