| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna29734.1-v1.0-hybrid |
| Family | CBM57 |
| Protein Properties | Length: 682 Molecular Weight: 74929.5 Isoelectric Point: 7.0308 |
| Chromosome | Chromosome/Scaffold: 3 Start: 4458976 End: 4463465 |
| Description | receptor like protein 4 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 264 | 374 | 5.2e-23 |
| PNFYPAGLYERAIVSSDSKPDIEYTMDVDPNRNYSIWLHFAEIDESINGVGQRVFDIIINGDIAFEEVDIVKFSGDRNSALVLNTTVPVNGRSLTITLKP KNRDHAIICAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 682 Download |
| MKIANVYKIS VYYLIFCFIF LFLIGWCFAF NLSDGVSSTA PYAMRINCGA RHDVHTAPTN 60 TLWYRDFGYT GGIPANASLP SYVSPHLDTL RYFPLSEGPE NCYIINRVPK GHYSVRVFFG 120 SVQLKSDDLE PLFDISVEGT LITSLKSGWS NVDDQVFAEA QVFLTDGSVS ICFHSTGHGD 180 PAILALEILQ IDDKAYQFSQ HSGQGIILRT VLRLSCGDGR PKFGADYGGD PWGGDRFWKP 240 ITTFGGGDKS ISIEASIKQV SKPPNFYPAG LYERAIVSSD SKPDIEYTMD VDPNRNYSIW 300 LHFAEIDESI NGVGQRVFDI IINGDIAFEE VDIVKFSGDR NSALVLNTTV PVNGRSLTIT 360 LKPKNRDHAI ICAIEIFEII VAESKTLPDE VKALQTLKTT LGLPVRLGWN GDPCVPQQHP 420 WSGADCQFDK STSKWVIDGL GLDNQGLKGF LQNDISKLRH LQSINLSGNN IHGAIPSSLG 480 AIPSLEVLDL SYNSFNGSIP ETLGQLTSLQ RLYLNSNSLS GRVPAALGGR LLHRASFNFT 540 DNHGLCGIPG LRTCGPHLTA GAKIGLAFGV LGSAVGKGGR IYCEHSKWLQ EKLHMQRRGP 600 IYPRTFSCPG TIIIMANREQ QLKMDRFCFH DPTNLQLTLI PNLVKVCYCL GARTAVDPRH 660 ESLAIRVDGL ACLHQYSFSQ P* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 5.0e-12 | 440 | 554 | 118 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 3.0e-14 | 440 | 551 | 112 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 2.0e-14 | 440 | 529 | 90 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam12819 | Malectin_like | 1.0e-61 | 46 | 366 | 335 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 26 | 571 | 551 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rgz_A | 0.000000000006 | 412 | 556 | 611 | 750 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3rgz_A | 0.000000008 | 436 | 527 | 467 | 558 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3rgz_A | 0.00000005 | 426 | 527 | 389 | 486 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3rgz_A | 0.000002 | 447 | 528 | 454 | 535 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3rgz_A | 0.0007 | 461 | 528 | 370 | 439 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
