| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna29878.1-v1.0-hybrid |
| Family | GT5 |
| Protein Properties | Length: 579 Molecular Weight: 65307.7 Isoelectric Point: 6.5414 |
| Chromosome | Chromosome/Scaffold: 4 Start: 1445188 End: 1454004 |
| Description | starch synthase 4 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 96 | 573 | 0 |
| IVHVTAEMAPIAKVGGLGDVVTGLARACLSRGHTVHIMLPFYECIQKHQINNLTLITTYNSYHDGNWIPTNAYHGQVSGIPVIFIEPSNQFFKGHQVYGG SYNELEAYLFFSRACLEWMQVTGTQPDIIHVHEWQVGALPILYWDMYHYLSLKKPRIVLTIHNMEHYGECRQEQLSMCGLDGSLYATFDKAVDDRTVGHN PERLSLLKGGIVYSNAVVTVSPTYLKETLCSGWLSSTLLRNHDKYFGIVNGIDTTMWNPSTDVFLPSNFDVKNSEGKKLCKYYVQRGLGLTSGDHLTETT LKVPLVICITRLVAQKGLHLITHAIKQVEELGGQMIILGKASDHRVEREFEDLADSLNQGPSIRILLMYSEELSHLLYAAADIVLVPSMYEPCGLAQIIG MRYGAVYTVFDIDDQSNHEMANGFVFEGIDEASLNFALDRAFACYRNKPEEWNCIVKKVMKMDNSWNITAGKYIEIYE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 579 Download |
| MEYGKLLSAS TTSSLWNPRR KLLKAHNFKF RIEAQTHRTS QVGIAKPTNL THLDIQGFDW 60 PSPTDEIPFW KKQFPSWDVN SELPSQQTKD SKLMDIVHVT AEMAPIAKVG GLGDVVTGLA 120 RACLSRGHTV HIMLPFYECI QKHQINNLTL ITTYNSYHDG NWIPTNAYHG QVSGIPVIFI 180 EPSNQFFKGH QVYGGSYNEL EAYLFFSRAC LEWMQVTGTQ PDIIHVHEWQ VGALPILYWD 240 MYHYLSLKKP RIVLTIHNME HYGECRQEQL SMCGLDGSLY ATFDKAVDDR TVGHNPERLS 300 LLKGGIVYSN AVVTVSPTYL KETLCSGWLS STLLRNHDKY FGIVNGIDTT MWNPSTDVFL 360 PSNFDVKNSE GKKLCKYYVQ RGLGLTSGDH LTETTLKVPL VICITRLVAQ KGLHLITHAI 420 KQVEELGGQM IILGKASDHR VEREFEDLAD SLNQGPSIRI LLMYSEELSH LLYAAADIVL 480 VPSMYEPCGL AQIIGMRYGA VYTVFDIDDQ SNHEMANGFV FEGIDEASLN FALDRAFACY 540 RNKPEEWNCI VKKVMKMDNS WNITAGKYIE IYESVAAS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0297 | GlgA | 2.0e-114 | 94 | 577 | 500 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 6.0e-144 | 94 | 578 | 507 | + glycogen synthase; Provisional | ||
| PLN02939 | PLN02939 | 9.0e-157 | 96 | 577 | 498 | + transferase, transferring glycosyl groups | ||
| TIGR02095 | glgA | 6.0e-157 | 94 | 575 | 496 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 1.0e-168 | 96 | 574 | 496 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 94 | 572 | 1 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 94 | 572 | 1 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 94 | 572 | 1 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 94 | 572 | 1 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 94 | 572 | 1 | 473 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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