| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna30033.1-v1.0-hybrid |
| Family | CBM57 |
| Protein Properties | Length: 1008 Molecular Weight: 110147 Isoelectric Point: 7.0294 |
| Chromosome | Chromosome/Scaffold: 3 Start: 25049317 End: 25062957 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 569 | 708 | 4.3e-23 |
| IKCGGPQITSSSNIVYQTENETLGPASYFVNDESRWAVSNIGYFTGSSKPQYYGLGLENGNYTVNLQFAEQAILDSTTWKSLGRRVFNIYIQGNLVLKDF DIRKEAGGSFLAVQKEYTVPVSENFLEIHLFWAGKGTCCV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1008 Download |
| MNFFPDLQHL ISNSQNQHLH KKSSKENLPD EGRGEEEAAV RRGGIGGKAR RNRRFRLAAE 60 RRGGIGGECG RPSVLYPPAR LHPRRLQQRP QPLFLPGKFV LFQFPARSPK TSNKIDLAGK 120 LEKNGLTDPS NLLFGCGGWA MVAPFHRARG RQACLEGQSG VSSKAAWMPP SGKMRLRVTG 180 TIFQWQHVRK VVRHSNLWLC MSIVFPQGQS PLPLAPPDRN VLSALVLLGR RGRELRVLEV 240 LHLRFYLGIT AKALNSIFAQ WGIEANAEQW NTTGDPCSGA AIDSTAFDDV DYNPFIKCVC 300 SDNVTCHITQ LKVYALDVDG VLPDELWTLS YLSNLKLGQN YFTGPLSASI GNLTSMQYLD 360 FSINALSGEL PKELGELTEL IVFYLDSSGV SGEIPSTFAN LQSLQTVRFQ GNSFEGPIPS 420 ALSNLTSLTE LIITDLSTTN GSSSLGFIMD MKSLSVLVLR NNNISDSIPS NIGEYKSLTQ 480 LDLSFNNLTG QIPDSLFNLS SLSILFLGNN KLNGTIPESK SSSLLNMNFV ANNFTLGSSN 540 SSALPSGLNC LQRDFPCNSG SGIFSNFGIK CGGPQITSSS NIVYQTENET LGPASYFVND 600 ESRWAVSNIG YFTGSSKPQY YGLGLENGNY TVNLQFAEQA ILDSTTWKSL GRRVFNIYIQ 660 GNLVLKDFDI RKEAGGSFLA VQKEYTVPVS ENFLEIHLFW AGKGTCCVPA QGTYGPIVSA 720 ISATPDFEPT VSNKIPTSKK NRTGLIVGIV VGGGVLILVM VVLYIVRRRK RPNFDDVEEL 780 LGIDIGPLTF SYSELKSATN DFSPENKLGE GGFGPVYKVL MKDDLPKLGY LAPEYAMRGH 840 LTEKTDVFAF GVVALEIVSG RPNSDPSLEE DKVYLLEWAW NLHENNHELE LVDYRLSEFS 900 EEEAKRIMKI GLLCTQTSPM LRPTMSGVVG VRTGAIEVTT AASKPGYLTD LKFIDATASN 960 ISLGMSTQGT DPSFYNSSAS TSIIGDARQT PSNATHPILH DTVNDGR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 2.0e-16 | 307 | 545 | 244 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 8.0e-19 | 270 | 519 | 252 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 4.0e-22 | 313 | 566 | 267 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 3.0e-22 | 311 | 568 | 269 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 1.0e-50 | 566 | 721 | 168 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004672 | protein kinase activity |
| GO:0005515 | protein binding |
| GO:0006468 | protein phosphorylation |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rj0_A | 2e-16 | 332 | 500 | 393 | 559 | A Chain A, Peanut Peroxidase |
| PDB | 3rj0_A | 0.0000000000001 | 305 | 518 | 242 | 457 | A Chain A, Peanut Peroxidase |
| PDB | 3rj0_A | 0.0000000000004 | 308 | 522 | 441 | 699 | A Chain A, Peanut Peroxidase |
| PDB | 3rj0_A | 0.000000000004 | 317 | 518 | 474 | 719 | A Chain A, Peanut Peroxidase |
| PDB | 3rj0_A | 0.000000000008 | 316 | 440 | 591 | 712 | A Chain A, Peanut Peroxidase |
