Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna30090.1-v1.0-hybrid |
Family | GT47 |
Protein Properties | Length: 506 Molecular Weight: 56289.4 Isoelectric Point: 6.656 |
Chromosome | Chromosome/Scaffold: 6 Start: 11953687 End: 11957115 |
Description | Exostosin family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 216 | 498 | 0 |
EKRFKVFVYEEGEPPLFHNGPCKSIYSMEGNFIHEIEVNKQFRTRNPEEAHVYFLPYSVTMLVRFVYVRDSHDFSPIRQTVRDYVNIISTKYPYWNRSLA ADHFTVACHDWGPETSNSDPYLRKNSIRGLCNANTSEGFNPSKDVSFPEVNLQTGDTHGFLGGPSPRLRSILAFFAGGVHGPIRPILLEHWENKDKDMRV HQYLPKGVSYYDMMKKSKFCLCPSGYEVASPRVVEAIYTGCVPVLISDHYVPPFSDVLNWKSFSVEVSIRHIQEDPALSDLLT |
Full Sequence |
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Protein Sequence Length: 506 Download |
MANGNKKPGG GGAGGSGGGT TAACWSSSSY KAILVFIVPL VVVFGLISLL SPKSSNWVFI 60 SNYYLAGPSP NTSASNLSEI GASHDDVLGL RSTVVVMDMH SSTIEEVHSD DYVQNRSASP 120 PLAVEEATPP PLEPIINGTN DEVPMNETDA NSAMDNPATR RKEYTHLGRL EGRLRRARVA 180 IREAKFANKT HDADYIPNGP MYWNANAFQR SYLEMEKRFK VFVYEEGEPP LFHNGPCKSI 240 YSMEGNFIHE IEVNKQFRTR NPEEAHVYFL PYSVTMLVRF VYVRDSHDFS PIRQTVRDYV 300 NIISTKYPYW NRSLAADHFT VACHDWGPET SNSDPYLRKN SIRGLCNANT SEGFNPSKDV 360 SFPEVNLQTG DTHGFLGGPS PRLRSILAFF AGGVHGPIRP ILLEHWENKD KDMRVHQYLP 420 KGVSYYDMMK KSKFCLCPSG YEVASPRVVE AIYTGCVPVL ISDHYVPPFS DVLNWKSFSV 480 EVSIRHIQED PALSDLLTGT ESGIR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 8.0e-62 | 215 | 489 | 293 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |