| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna30095.1-v1.0-hybrid |
| Family | CE8 |
| Protein Properties | Length: 436 Molecular Weight: 46844.1 Isoelectric Point: 7.5727 |
| Chromosome | Chromosome/Scaffold: 6 Start: 11981453 End: 11983915 |
| Description | pectin methylesterase 44 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 109 | 404 | 0 |
| NVTVSQDGKGNFKLIMDAIKAAPSHSNNHYVILVKKGVYKEYVNIDQTKTNIVLMGEGKEATIISGSKSVGGGQQTFDSATFAVSAQGFVAIDIGFENTA GQKNMQAVAVLSAGDHAAFHRCKITGNQDTLLVHAGRQFFRECEIICTVDFIFGYGTAVFQKCNIYIRKNKIGGTSVISAHGRNSSTEASGFSFHDCAIN GDPQPPTNSSTHAGAYLGRNWGTFARTVFMHSTISNVVRPEGWLQWQSDPVDKLYFGEFQNSGPGAADGGRVKWPGFHQMTAADADKFTVAKFIDG | |||
| Full Sequence |
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| Protein Sequence Length: 436 Download |
| MVVVVVERKH KIGLLEPMGL VAVRLEGSAW FVGRVVDMGQ DIGLVSQETC KEVLDSTRRS 60 LEQVTTSIYQ ILDTLQVPQG TPDFCKASGA PILIGSTGPD DVKIPKTPNV TVSQDGKGNF 120 KLIMDAIKAA PSHSNNHYVI LVKKGVYKEY VNIDQTKTNI VLMGEGKEAT IISGSKSVGG 180 GQQTFDSATF AVSAQGFVAI DIGFENTAGQ KNMQAVAVLS AGDHAAFHRC KITGNQDTLL 240 VHAGRQFFRE CEIICTVDFI FGYGTAVFQK CNIYIRKNKI GGTSVISAHG RNSSTEASGF 300 SFHDCAINGD PQPPTNSSTH AGAYLGRNWG TFARTVFMHS TISNVVRPEG WLQWQSDPVD 360 KLYFGEFQNS GPGAADGGRV KWPGFHQMTA ADADKFTVAK FIDGNSWLPA LGIPFSPGVK 420 PSADPPKWGL EYSSS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02468 | PLN02468 | 1.0e-103 | 106 | 418 | 314 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN03043 | PLN03043 | 9.0e-106 | 94 | 419 | 330 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
| PLN02506 | PLN02506 | 7.0e-108 | 44 | 420 | 398 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02201 | PLN02201 | 1.0e-124 | 37 | 419 | 416 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 1.0e-137 | 109 | 405 | 301 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 108 | 419 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 109 | 419 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 1e-26 | 113 | 411 | 12 | 341 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 1e-26 | 113 | 411 | 12 | 341 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 4e-26 | 113 | 411 | 12 | 341 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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