Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna30476.1-v1.0-hybrid |
Family | GH35 |
Protein Properties | Length: 868 Molecular Weight: 95909 Isoelectric Point: 4.6978 |
Chromosome | Chromosome/Scaffold: 3 Start: 2559286 End: 2563934 |
Description | beta-galactosidase 8 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 38 | 333 | 0 |
LVIDGKRRVLQSGSIHYPRSTPEVWPEIINKAKEGGLDVIETYVFWNYHEPVKGQYYFEGRFDLVRFVKTVQEAGLLVHLRIGPYACAEWNYGGFPIWLH FIPGIQFRTTNAPFKNEMKHFLAKIVEMMKEENLFATQGGPIILAQVENEYGNVEWSYGVGGELYVQWAAETAVSLNTSVPWVMCAQDDAPDPIINTCNG FYCDRFTPNSPSKPKMWTENYSGWFLGFGNPIPYRPVEDLAFAVARFFETGGTFQNYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEYGKLSSSWL |
Full Sequence |
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Protein Sequence Length: 868 Download |
MGSNIWVAFL LFFIIITYEG YFIETVNSAT VTYDHRALVI DGKRRVLQSG SIHYPRSTPE 60 VWPEIINKAK EGGLDVIETY VFWNYHEPVK GQYYFEGRFD LVRFVKTVQE AGLLVHLRIG 120 PYACAEWNYG GFPIWLHFIP GIQFRTTNAP FKNEMKHFLA KIVEMMKEEN LFATQGGPII 180 LAQVENEYGN VEWSYGVGGE LYVQWAAETA VSLNTSVPWV MCAQDDAPDP IINTCNGFYC 240 DRFTPNSPSK PKMWTENYSG WFLGFGNPIP YRPVEDLAFA VARFFETGGT FQNYYMYFGG 300 TNFGRTAGGP LVATSYDYDA PIDEYGKLSS SWLENATSPF VNRNCIPSSY AAFLRQPKWG 360 HLRDLHKAIK HCEEYLISSD PTQLQLGLNL EAHIYYKHSN ECAAFLANYG SSSDANVTFN 420 GHVYFLPAWS VSILPDCKNV IFNTAKVVSQ RTAGDPIFAS TTLEPSSWGW YKETVGSWSN 480 SSFSSPGLLE QISTTKDTSD FLWYSISINI GPDQGTELFL NIESLGHAAL IFVNKKPIGF 540 GYGNHEDASF ILNELVALNP GNNTVDMLSM MIGVQNYGPW FDIAGAGIFF VAIGDLDTGK 600 VDLSGEEWTY QVGLEGEYLG LANISLANSS LWTTGANPPV SQTLIWYKVS FLAPEGKGPL 660 ALDLASMGKG QAWVNGQGIG RYWSTYLSPS TGCNSSSGCD YRGAYDANKC LKNCGQPAQT 720 LYHIPRTWVH DGENLLVLHE ELGGDPSKIS VRTRTGQEIC AYISDTDPPP ANSWKPNSEF 780 ISQKPEVQLT CDQGWHITSI IFASYGTPIG SCGTTFTMGT CHADVLTIIE QACLGEEECS 840 ITISTETLGD PCPGVLKSLA VQALCSN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 3.0e-5 | 53 | 189 | 154 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 4.0e-16 | 789 | 865 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 3.0e-19 | 31 | 192 | 172 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-148 | 37 | 369 | 348 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 7 | 866 | 871 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 1.96182e-44 | 25 | 334 | 2 | 321 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 3e-38 | 31 | 353 | 11 | 349 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 3e-38 | 31 | 353 | 11 | 349 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_B | 3e-38 | 31 | 353 | 11 | 349 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |