Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna30596.1-v1.0-hybrid |
Family | GH47 |
Protein Properties | Length: 729 Molecular Weight: 81175.3 Isoelectric Point: 8.6236 |
Chromosome | Chromosome/Scaffold: 3 Start: 1758409 End: 1762647 |
Description | alpha-mannosidase 3 |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH47 | 237 | 721 | 0 |
AFIHAWSGYKRYAMGFDELMPLSKQGVDGLGGLGATVVDALDTAMIMGVDEVVSEAGSWIEKHLSSRISEKGQVNLFETTIRVLGGLLSAYHLSSVNQGT NSTRKGPEPAVYLETAKNLADRLLSGFTSSPTAIPFGDVVLREPSAHPAPDGLSSTSEVSTLQLEFNYLSTVSNDPKYTVAAMKVLEHMKTLPKVEGLVP IFINPNTGEFSGNNIRLGSRGDSYYEYLLKVWLQKGPNRESNLTYLYDMYEEAMKGVKHRLVRKSIPNGLVFIGELPYGAEGDFSPKMDHLVCFLAGTLA LGATKGVTKEKALRDNLLNFEDLENLNLAEDLAETCFQMYSVTSTGLAPEIAYFHTEEYSDGHLDGGNKSSKYLNDIIIKRADRHNLLRPETVESLFVLY RITEDPKYREWGWQIFEAFEKYTRVDTGGYSSLDDVTTIPPHKRDKMETFFLGETLKYLYLLFGDSSHVPLDKYVFNTEAHPIPI |
Full Sequence |
---|
Protein Sequence Length: 729 Download |
MNCRSSQNHI QRRAQNDVAQ QPKKPFSLFT GSPPLHSKRR AIPPILLQPL TSFPRIQLRA 60 RTRKPEPEIR NTYSQISPES ERRHIPIRAR DDGAPAQQAA IGSPIMSSKS LPYSNKDILY 120 DNAKFRHRSV FKVINQTLLA SKVKHHCTSC STGKFLALLM IFGIACLLLT HTSSTGSVSY 180 GVVNGSRNDT YEHNISGGIR FGNLLRRAPR LPPQLTPDQI GSSGPNWVDR QENVKKAFIH 240 AWSGYKRYAM GFDELMPLSK QGVDGLGGLG ATVVDALDTA MIMGVDEVVS EAGSWIEKHL 300 SSRISEKGQV NLFETTIRVL GGLLSAYHLS SVNQGTNSTR KGPEPAVYLE TAKNLADRLL 360 SGFTSSPTAI PFGDVVLREP SAHPAPDGLS STSEVSTLQL EFNYLSTVSN DPKYTVAAMK 420 VLEHMKTLPK VEGLVPIFIN PNTGEFSGNN IRLGSRGDSY YEYLLKVWLQ KGPNRESNLT 480 YLYDMYEEAM KGVKHRLVRK SIPNGLVFIG ELPYGAEGDF SPKMDHLVCF LAGTLALGAT 540 KGVTKEKALR DNLLNFEDLE NLNLAEDLAE TCFQMYSVTS TGLAPEIAYF HTEEYSDGHL 600 DGGNKSSKYL NDIIIKRADR HNLLRPETVE SLFVLYRITE DPKYREWGWQ IFEAFEKYTR 660 VDTGGYSSLD DVTTIPPHKR DKMETFFLGE TLKYLYLLFG DSSHVPLDKY VFNTEAHPIP 720 IEGATKRV* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 4.0e-165 | 230 | 721 | 497 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 0 | 237 | 721 | 488 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fo3_A | 0 | 230 | 721 | 10 | 456 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1fo2_A | 0 | 230 | 721 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1fmi_A | 0 | 230 | 721 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1x9d_A | 0 | 206 | 721 | 63 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1g6i_A | 0 | 222 | 721 | 32 | 528 | A Chain A, Crystal Structure Of The Yeast Alpha-1,2-Mannosidase With Bound 1- Deoxymannojirimycin At 1.59 A Resolution |
Sequence Alignments (This image is cropped. Click for full image.) |
---|