| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna31035.1-v1.0-hybrid |
| Family | CE8 |
| Protein Properties | Length: 292 Molecular Weight: 31816.6 Isoelectric Point: 5.1079 |
| Chromosome | Chromosome/Scaffold: 1 Start: 2230400 End: 2231363 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 12 | 119 | 5e-35 |
| FVVAKDGSANFTTISDAIKAAPNYSSKRINIKVMAGVYNEYIIVGKEKSNLTIIGEGIDKTVISGSRSNATGFRTHDSATVEVQGYGFTAKYLTIENTAG PGEQAVSL | |||
| CE8 | 121 | 273 | 0 |
| KCEIYGTVDFIFGNAQVVFQRSNVYARKPVQGQFITITAQGKETSSDTSGTVFQNCTFRATSELINSGFRVDAYLGRPWQAYSTTIIMQSFLESFIDPTG WLDWDGRSSSAGLFYAEYANQGPGANTTSRVNWKEYKVLNSSEASNFTIRSFI | |||
| Full Sequence |
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| Protein Sequence Length: 292 Download |
| MWAAMGQDEI GFVVAKDGSA NFTTISDAIK AAPNYSSKRI NIKVMAGVYN EYIIVGKEKS 60 NLTIIGEGID KTVISGSRSN ATGFRTHDSA TVEVQGYGFT AKYLTIENTA GPGEQAVSLL 120 KCEIYGTVDF IFGNAQVVFQ RSNVYARKPV QGQFITITAQ GKETSSDTSG TVFQNCTFRA 180 TSELINSGFR VDAYLGRPWQ AYSTTIIMQS FLESFIDPTG WLDWDGRSSS AGLFYAEYAN 240 QGPGANTTSR VNWKEYKVLN SSEASNFTIR SFIIGDQWLP STGVPYDPNL I* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02745 | PLN02745 | 4.0e-88 | 13 | 285 | 304 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 1.0e-89 | 13 | 290 | 309 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02416 | PLN02416 | 2.0e-94 | 13 | 287 | 306 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 1.0e-105 | 13 | 291 | 313 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 6.0e-118 | 13 | 276 | 296 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 13 | 290 | 10 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 13 | 286 | 6 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 0.0000000003 | 22 | 245 | 44 | 335 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.00000009 | 13 | 281 | 7 | 340 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.00000009 | 13 | 281 | 7 | 340 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Hydropathy |
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| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Cucumis sativus | Cucsa.327180.1.15.137 | Cucsa.327180.1.15.137 | |||
| Fragaria vesca | mrna31035.1-v1.0-hybrid.12.119 | mrna31035.1-v1.0-hybrid.12.119 | |||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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