Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna31599.1-v1.0-hybrid |
Family | CE8 |
Protein Properties | Length: 507 Molecular Weight: 55939.1 Isoelectric Point: 6.3957 |
Chromosome | Chromosome/Scaffold: 1 Start: 13739157 End: 13746250 |
Description | Pectin lyase-like superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 35 | 313 | 0 |
IVVDKNGKGQFTTVQQAVDSIPSNNSAWTQIYINPGVYNEKVEIKKPYIILKGDYHNRPVIEFGDSGSVVDSPTFKLNADNFVARNIVFKNTYDHLLPSK LEANRVNTTWAPAAAIAGDKASFYDCNFISLQDTLTDATGRHYFRHCNISGAIDFIWGNGQSIYQNCDINSLASKIAPVAGYITAQAREKPEETTGFVFN NCHVTGSGRINLGRAHTKYARVLFAGTIMNNIITPQGWDAASSQGSENLISFSEANCTGPGADMSKRVSWEKKLSDQES |
Full Sequence |
---|
Protein Sequence Length: 507 Download |
MESFIISVTL ALFFLLNGLD ARKYGLVLDQ ESAAIVVDKN GKGQFTTVQQ AVDSIPSNNS 60 AWTQIYINPG VYNEKVEIKK PYIILKGDYH NRPVIEFGDS GSVVDSPTFK LNADNFVARN 120 IVFKNTYDHL LPSKLEANRV NTTWAPAAAI AGDKASFYDC NFISLQDTLT DATGRHYFRH 180 CNISGAIDFI WGNGQSIYQN CDINSLASKI APVAGYITAQ AREKPEETTG FVFNNCHVTG 240 SGRINLGRAH TKYARVLFAG TIMNNIITPQ GWDAASSQGS ENLISFSEAN CTGPGADMSK 300 RVSWEKKLSD QESFISITLA FFFLFGALDA HPYPITYDPQ QDVVSRTITV HKHGRGDFAS 360 VQQAIDSIPS NNHVWTRILI NSGVYVEKVE IPQDKPYIIL EGNPNRFGHF PVIEFGTDAG 420 DVVKSPAFKL HADNFVALNI VFKSESDRRK CLPHGVRDRQ HGEDSLVAVA LTKEELEDPP 480 LNQIPEVGAR ETGRRGPVVV IQIFFV* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02682 | PLN02682 | 3.0e-16 | 344 | 446 | 119 | + pectinesterase family protein | ||
PLN02497 | PLN02497 | 3.0e-20 | 343 | 442 | 100 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 4.0e-84 | 32 | 318 | 293 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-87 | 32 | 318 | 302 | + pectinesterase family protein | ||
PLN02497 | PLN02497 | 6.0e-104 | 5 | 311 | 311 | + probable pectinesterase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 2e-31 | 35 | 305 | 9 | 282 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1gq8_A | 0.004 | 340 | 450 | 1 | 111 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 3e-24 | 33 | 304 | 3 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 9e-24 | 10 | 323 | 17 | 358 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |