Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna31843.1-v1.0-hybrid |
Family | GH9 |
Protein Properties | Length: 761 Molecular Weight: 84788.8 Isoelectric Point: 6.5781 |
Chromosome | Chromosome/Scaffold: 5 Start: 2002496 End: 2009299 |
Description | glycosyl hydrolase 9B15 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 307 | 756 | 0 |
DYKDALGKSILFFEGQRSGKLPNSQRVVWRGDSALSDGQLEGVNLTGGYYDAGDNVKFGWPMAYSVSLLSWSLIEYQQQISSAKQLAYLQGAIRWGTEFI IKAHPSPTTFYTQVGDGNADHQCWERPEDMDTSRKLYKITSSSPGSEAAAEAAAALAAASIVFKTVDSTYSAKLLRYSKSLFDLADKYRGSYQVSCPFYC SYSGYQDELLWAAAWLYKASGNRSYLSYVLNNQGWSQAMSEFSWDNKFVGAQTILAKEYHAGNTNLLKYKTDAESFICAVMPGSSSSQVQRTPGGLLFIR DSSNLQYVTSSTLVLFIYSKTISSTQTRGVQCGSMFFSAEKIKAFAKSQVDYILGANPKKMSYMVGFGTTYPTKVHHRGSSIPSIKKVRTKVDCNGGYTY YNSGSPNPNTHVGAIVGGPDVNDQFQNARSDYSHSEPTTYINAAFVGSAA |
Full Sequence |
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Protein Sequence Length: 761 Download |
MENSWDLQAV VRGCNNNLEG FANTMEFSQS SCVGFAPATI EEDDDIFRTF PQLFDTTTAL 60 DELEELYKPF YPNLQPISPI IPNPTPAASV LQEVAKEEKE EPKKLKSLKE SSPICKRSRK 120 NQSKRVVKEV KEQDLFSDVW AWRKYGQKPI KGSPYPRSYY RCSSSKGCSA RKQVERSNSN 180 PELFIITFTA EHNHDHPTRR NSLAGSTRTK FPKSQNNEKS KHAFVPVKEE AHRLLEEDEV 240 SQESATDMML GDEAVPSFED FDRKLEELNE LMAEPVMTDD FFSDQYLSDS YFPSSWFLGH 300 SSISAIDYKD ALGKSILFFE GQRSGKLPNS QRVVWRGDSA LSDGQLEGVN LTGGYYDAGD 360 NVKFGWPMAY SVSLLSWSLI EYQQQISSAK QLAYLQGAIR WGTEFIIKAH PSPTTFYTQV 420 GDGNADHQCW ERPEDMDTSR KLYKITSSSP GSEAAAEAAA ALAAASIVFK TVDSTYSAKL 480 LRYSKSLFDL ADKYRGSYQV SCPFYCSYSG YQDELLWAAA WLYKASGNRS YLSYVLNNQG 540 WSQAMSEFSW DNKFVGAQTI LAKEYHAGNT NLLKYKTDAE SFICAVMPGS SSSQVQRTPG 600 GLLFIRDSSN LQYVTSSTLV LFIYSKTISS TQTRGVQCGS MFFSAEKIKA FAKSQVDYIL 660 GANPKKMSYM VGFGTTYPTK VHHRGSSIPS IKKVRTKVDC NGGYTYYNSG SPNPNTHVGA 720 IVGGPDVNDQ FQNARSDYSH SEPTTYINAA FVGSAAALLA * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02308 | PLN02308 | 8.0e-176 | 307 | 753 | 456 | + endoglucanase | ||
PLN02171 | PLN02171 | 3.0e-177 | 307 | 753 | 463 | + endoglucanase | ||
PLN02613 | PLN02613 | 0 | 297 | 754 | 462 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 307 | 754 | 461 | + Glycosyl hydrolase family 9. | ||
PLN02266 | PLN02266 | 0 | 281 | 754 | 488 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0003700 | sequence-specific DNA binding transcription factor activity |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0006355 | regulation of transcription, DNA-dependent |
GO:0043565 | sequence-specific DNA binding |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 305 | 760 | 2 | 430 | A Chain A, The Structure Of The Rrm Domain Of Sc35 |
PDB | 1ksc_A | 0 | 305 | 760 | 2 | 430 | A Chain A, The Structure Of The Rrm Domain Of Sc35 |
PDB | 1ks8_A | 0 | 305 | 760 | 2 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 305 | 759 | 3 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 305 | 759 | 3 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
Sequence Alignments (This image is cropped. Click for full image.) |
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