Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna32588.1-v1.0-hybrid |
Family | GH47 |
Protein Properties | Length: 605 Molecular Weight: 67603.8 Isoelectric Point: 4.9002 |
Chromosome | Chromosome/Scaffold: 4 Start: 2254203 End: 2263324 |
Description | Glycosyl hydrolase family 47 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 48 | 468 | 0 |
MFYHAFNGYMDHAFPLDELKPQSCGGEDSLGGYALTLIDALDTLALLGDRDRFSASVEWISKNLQFDINKTVSVFETTIRVLGGLLSAHLIASDYATGMR IPTYDNQLLNLAEDLGRRLLPAFDTPSGIPFGSVNLRHGVDEHESKITSTAGGGTLTLEFGVLSRLTNDSIFEQATKNAVRGLWAQRSKLNLVGAHINVF TGEWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLYIFQEAYAAAMQYLYNDPWYVEVNMDSAAVVWPLFNSLQAFWPGLQVLAGDIDPAIRTHTAFFSV WKKYGFTPEGFNLATFSVQHGQRSYPLRPELMESTYWLYKATRDPKYLDAGRDMVASLQYSARCACGYCHIADVESHKQEDHMESFFLAETIKDQAYLIA VYCENASSYRYIFSTEGHLLP |
Full Sequence |
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Protein Sequence Length: 605 Download |
MPSLRRPTSA SILVSLLFLF LSVFLCPTLA DGVTPEEAKQ LRDEVREMFY HAFNGYMDHA 60 FPLDELKPQS CGGEDSLGGY ALTLIDALDT LALLGDRDRF SASVEWISKN LQFDINKTVS 120 VFETTIRVLG GLLSAHLIAS DYATGMRIPT YDNQLLNLAE DLGRRLLPAF DTPSGIPFGS 180 VNLRHGVDEH ESKITSTAGG GTLTLEFGVL SRLTNDSIFE QATKNAVRGL WAQRSKLNLV 240 GAHINVFTGE WTQKDAGIGT SIDSFYEYLL KAYLLFGDEE YLYIFQEAYA AAMQYLYNDP 300 WYVEVNMDSA AVVWPLFNSL QAFWPGLQVL AGDIDPAIRT HTAFFSVWKK YGFTPEGFNL 360 ATFSVQHGQR SYPLRPELME STYWLYKATR DPKYLDAGRD MVASLQYSAR CACGYCHIAD 420 VESHKQEDHM ESFFLAETIK DQAYLIAVYC ENASSYRYIF STEGHLLPAT PEISLVQEHC 480 SYFGAYCNTS NIRQDVLDVA TNPRDNLYGR VGTALPSNSR YSDSTPGICP GLTHGQKFGI 540 SYISPGHRAH EDDSRNQGEQ TNGESHSIVI LQSQNSDYSP SENKYHEKLV EPHERKQTSD 600 PPQI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 7.0e-64 | 36 | 471 | 476 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 6.0e-156 | 48 | 468 | 456 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4ayr_A | 0 | 29 | 440 | 1 | 407 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 4ayq_A | 0 | 29 | 440 | 1 | 407 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 4ayp_A | 0 | 29 | 440 | 1 | 407 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 4ayo_A | 0 | 29 | 440 | 1 | 407 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
PDB | 1nxc_A | 0 | 24 | 472 | 1 | 468 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |