Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna34059.1-v1.0-hybrid |
Family | CBM57 |
Protein Properties | Length: 136 Molecular Weight: 15483.9 Isoelectric Point: 10.1027 |
Chromosome | Chromosome/Scaffold: 3 Start: 3796171 End: 3796645 |
Description | Leucine-rich repeat transmembrane protein kinase |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM57 | 2 | 120 | 5.3e-26 |
ENSQLYMNARFSPLSLTYYANCLGDGKYTVKLHFAEIIIRGNRSYRSVGRRIFDVYIQEKLVLKDFNIVKEAEGVDKEVIKETKAVQVKNKTLEIRFHWS GKGTTASPRRGIYGPLISA |
Full Sequence |
---|
Protein Sequence Length: 136 Download |
MENSQLYMNA RFSPLSLTYY ANCLGDGKYT VKLHFAEIII RGNRSYRSVG RRIFDVYIQE 60 KLVLKDFNIV KEAEGVDKEV IKETKAVQVK NKTLEIRFHW SGKGTTASPR RGIYGPLISA 120 ISIESSNLLN LYKLF* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12819 | Malectin_like | 0.001 | 26 | 123 | 99 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
PLN03150 | PLN03150 | 9.0e-7 | 16 | 123 | 108 | + hypothetical protein; Provisional | ||
pfam11721 | Malectin | 1.0e-49 | 1 | 121 | 122 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Sequence Alignments (This image is cropped. Click for full image.) |
---|