| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g002581m |
| Family | CBM57 |
| Protein Properties | Length: 906 Molecular Weight: 99013.4 Isoelectric Point: 6.22 |
| Chromosome | Chromosome/Scaffold: 00008 Start: 2116780 End: 2126914 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM57 | 380 | 548 | 7.7e-28 |
| SIKCGGPQMRADNIVYEADNSSLSASSYVVTSTEKWAVSNVGLFNEKENPAYVLNTLAQMTGTRTPELYQTSRITPGSLRYYGLGLENGPYKVSLLFAET SILDRSTERWESLGTRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAAVSENHLEIHLLWAGKGTC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 906 Download |
| MKQWDAPAVR LWNISGNPCS GSALNATDSA FESPDNNPAI VCDCTFDNGA TCHITKLRVY 60 ALNKKGVIPE ELVTLQYLTF LKIDRNFFTG PLPSFIGNLS RLTLLSLAHN VFSGPVPREL 120 GNLKELNLLS LANNNFSGAL PPEIGNLAKL EELYIDSCGA SGEIPSTFAK LHNMQILRAS 180 DAHFTGKIPD FIGNWTKLTA LRLQGNSFQG PIPSSLSKLA SLESLRISDI YFVSSSLDFV 240 MSLKNLKDLS LRNALITGTI PSGIGELQNL QTLDLSFNNL TGQIPRTLFN IDSLNYLFLG 300 NNSLSGTLPT QKSENLQNID LSYNHLSGPF PSWVTSSLQM NLAVNNFTFD GSNISVFPGL 360 QCLQRNFPCN RNAPRYANFS IKCGGPQMRA DNIVYEADNS SLSASSYVVT STEKWAVSNV 420 GLFNEKENPA YVLNTLAQMT GTRTPELYQT SRITPGSLRY YGLGLENGPY KVSLLFAETS 480 ILDRSTERWE SLGTRVFDIY IQGTLRWKDF DISKEAGGPN RAIIKNFNAA VSENHLEIHL 540 LWAGKGTCCV PTQGDYGPAI SALSAVSAFK PSVSGLPPGT PGNKNHTGMI VGIAVPLGIL 600 GLIVISIVFY MRRKKDNDDE EVLVGIESKP NTFSYAELRS ATKDFDPSNK LGEGGYGPVY 660 KGTLSDGRVI AVKQLSIASH QGKNQFVNEI ATISAVQHRN LVRLYGCCIE GARRLLVYDG 720 YLAPEYAMRG HLTEKADVFS FGVVALEVIS GRANSDNSLD TEKIYLLEWA WNLHENNQSL 780 GLVDPTLTEF NDKEALRVIG VALLCTQASP MMRPPMSRVV AMLAGDIEVG TVISKPSYLT 840 DWDFKDITAS FLNEDTPTPS SSIKRRKSKE KSQRENPVDD HSEGTDALVS PVNVTQLTDI 900 LAEGR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 8.0e-29 | 63 | 347 | 290 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 3.0e-29 | 36 | 364 | 342 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 2.0e-29 | 57 | 347 | 296 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 8.0e-30 | 66 | 331 | 268 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 1.0e-46 | 378 | 563 | 189 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004672 | protein kinase activity |
| GO:0005515 | protein binding |
| GO:0006468 | protein phosphorylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI39026.1 | 0 | 1 | 719 | 55 | 773 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI39026.1 | 0 | 720 | 905 | 864 | 1037 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002272404.1 | 0 | 1 | 719 | 10 | 730 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002272404.1 | 0 | 720 | 905 | 821 | 994 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002273016.1 | 0 | 1 | 719 | 55 | 775 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rgz_A | 5e-28 | 49 | 332 | 220 | 532 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3rgz_A | 1e-24 | 49 | 331 | 439 | 721 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3rgz_A | 4e-21 | 63 | 309 | 329 | 555 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3rgz_A | 0.000000000000001 | 78 | 348 | 102 | 381 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3rgz_A | 0.00000003 | 62 | 191 | 594 | 723 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
