Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g002867m |
Family | GH35 |
Protein Properties | Length: 873 Molecular Weight: 96705.9 Isoelectric Point: 8.3792 |
Chromosome | Chromosome/Scaffold: 00032 Start: 895627 End: 902276 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 41 | 343 | 0 |
AINGKRRILISGSIHYPRSSPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFIKLAKQAGLYVNLRIGPYVCAEWNFGGFPVWLKY IPGINFRTENGPFKAEMHKFTKKIVDMMKAERLFESQGGPIILSQIENEYGPMEYEIGAPGRSYTRWAAKMAVGLGTGVPWIMCKQDDAPDPLINTCNGF YCDYFSPNKAYKPKMWTEAWTGWYTEFGGPVPHRPVEDLAFSVAKFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKD LHR |
Full Sequence |
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Protein Sequence Length: 873 Download |
MGMTKQLGMC NVLLILLLGC SGLFAPVEVE GSVSYDSKAI AINGKRRILI SGSIHYPRSS 60 PEMWPDLIQK AKDGGLDVIQ TYVFWNGHEP SPGKYYFEGN YDLVKFIKLA KQAGLYVNLR 120 IGPYVCAEWN FGGFPVWLKY IPGINFRTEN GPFKAEMHKF TKKIVDMMKA ERLFESQGGP 180 IILSQIENEY GPMEYEIGAP GRSYTRWAAK MAVGLGTGVP WIMCKQDDAP DPLINTCNGF 240 YCDYFSPNKA YKPKMWTEAW TGWYTEFGGP VPHRPVEDLA FSVAKFIQKG GSFINYYMYH 300 GGTNFGRTAG GPFIATSYDY DAPLDEYGLL RQPKWGHLKD LHRAIKLCEP ALVSGNPTVM 360 PLGNYQEAHV FKSKSACAAF LANYNQRTFA KVAFGNQHYN LPPWSISILP DCKNTVYNTA 420 RVGHQSTQMK MTPVPIHGGF SWQAFNEVPS AYGDSSFTMS GLLEQINTTR DATDYLWYMT 480 DVKIDPSEGF LRSGNYPVLT VMSAGHALHV FVNGQLAGTA YGSLEFPKLT FTEGVNMRAG 540 INKIALLSIA VGLPNVGPHF ETWNAGVLGP VTLNGLNEGR RDLSWQKWTY KVCLQSLKYG 600 FLVSLTFWIL IEVCLLNQIG LEGEKLNLHS LSGGSSVEWA EGSLVAQRQP LTWYRTTFSA 660 PAGNAPLALD MGSMGKGQVW VNGQSIGRHW PAYKASGSCG YCSYTGTYTE KKCLSNCGEA 720 SQRWYHVPRS WLKPTGNLLV VFEEWGGNPN GISLVRREID SVCAYMYEWQ PTLINWQLHA 780 SGKVNKPLRP KAHLMCGPGQ KIKSIKFASF GTPEGVCGSY RQGSCHAFHS YDAFQRLCVG 840 QNMCTVTVAP EMFGGDPCPS IMKQLAVEAI CG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 3.0e-8 | 55 | 191 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 2.0e-19 | 796 | 871 | 80 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 6.0e-24 | 33 | 335 | 363 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 4.0e-161 | 42 | 345 | 319 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 29 | 871 | 844 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK96254.1 | 0 | 29 | 871 | 29 | 845 | unknown [Populus trichocarpa x Populus deltoides] |
EMBL | CAC44500.1 | 0 | 27 | 871 | 24 | 842 | beta-galactosidase [Fragaria x ananassa] |
RefSeq | NP_187988.1 | 0 | 31 | 871 | 32 | 846 | BGAL1 (Beta galactosidase 1); beta-galactosidase/ catalytic/ cation binding / heme binding / peroxidase/ sugar binding [Arabidopsis thaliana] |
RefSeq | XP_002327432.1 | 0 | 29 | 871 | 22 | 838 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527409.1 | 0 | 3 | 871 | 5 | 844 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 30 | 341 | 5 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 8.96831e-44 | 32 | 414 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 8.96831e-44 | 32 | 414 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |