| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g003557m |
| Family | GT41 |
| Protein Properties | Length: 812 Molecular Weight: 91352 Isoelectric Point: 7.3255 |
| Chromosome | Chromosome/Scaffold: 00161 Start: 280502 End: 290228 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT41 | 291 | 579 | 0 |
| RPTMAEAHANLASAYKDSGHVEAAIKSYKQALLLRPDFPEATCNLLHTLQCVCSWEDRDRMFSEVEGIIRRQVNMSVLPSVQPFHAIAYPIDPMLALEIS RKYASHCSIIASRFALPPFNHPVPIPIRLDGGLRRLRVGYVSSDFGNHPLSHLMGSVFGMHNKENVEVFCYALSPNDGTEWRQRTQSEAEHFVDVSAMSS DMIAKLINEDKIQILINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGASYIDYLVTDEFVSPLRYAHIYSEKLVHVPHCYFVNDYKQ | |||
| GT41 | 591 | 791 | 0 |
| PKRSDYGLPEDKFIFACFNQLYKMDPEIFNTWCNILRRVPNSALWLLRFPAAGEMRLRAYAVAQGVQPDQIIFTDVAMKQEHIRRSSLADLFLDTPLCNA HTTGTDILWAGLPMITLPLEKMATRVAGSLCLATGLGEEMIVNSMKEYEERAVSLALDRQKLQALTNKLKSVRLTCPLFDTARWVKNLERSYFKMWSLHC S | |||
| Full Sequence |
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| Protein Sequence Length: 812 Download |
| MRKGRLNEAA QCCRQALALN PLLVDAHSNL GNLMKAQGLV QEAYSCYLEA LRIQPTFAIA 60 WSNLAGLFME SGDLNRALQY YKEAVKLKPT FPDAYLNLGN VYKALGMPQE AIMCYQRAVQ 120 TRPNAIAFGN LASTYYERGQ ADMAILYYKQ AIGCDPRFLE AYNNLGNALK DVGRVDEAIQ 180 CYNQCLSLQP SHPQALTNLG NIYMEWNMLP AAASYYKATL AVTTGLSAPF NNLAVIYKQQ 240 GNYADAISCY NEVLRIDPLA ADGLVNRGNT YKEIGRVTDA IQDYIRAITI RPTMAEAHAN 300 LASAYKDSGH VEAAIKSYKQ ALLLRPDFPE ATCNLLHTLQ CVCSWEDRDR MFSEVEGIIR 360 RQVNMSVLPS VQPFHAIAYP IDPMLALEIS RKYASHCSII ASRFALPPFN HPVPIPIRLD 420 GGLRRLRVGY VSSDFGNHPL SHLMGSVFGM HNKENVEVFC YALSPNDGTE WRQRTQSEAE 480 HFVDVSAMSS DMIAKLINED KIQILINLNG YTKGARNEIF AMQPAPIQVS YMGFPGTTGA 540 SYIDYLVTDE FVSPLRYAHI YSEKLVHVPH CYFVNDYKQK NMDVLDPNCQ PKRSDYGLPE 600 DKFIFACFNQ LYKMDPEIFN TWCNILRRVP NSALWLLRFP AAGEMRLRAY AVAQGVQPDQ 660 IIFTDVAMKQ EHIRRSSLAD LFLDTPLCNA HTTGTDILWA GLPMITLPLE KMATRVAGSL 720 CLATGLGEEM IVNSMKEYEE RAVSLALDRQ KLQALTNKLK SVRLTCPLFD TARWVKNLER 780 SYFKMWSLHC SGQKPQHFKV TENDLDFPCD R* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02917 | PEP_TPR_lipo | 4.0e-23 | 4 | 331 | 363 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. | ||
| pfam13844 | Glyco_transf_41 | 1.0e-68 | 430 | 579 | 151 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
| pfam13844 | Glyco_transf_41 | 2.0e-76 | 593 | 786 | 194 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
| COG3914 | Spy | 1.0e-95 | 231 | 787 | 567 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002325368.1 | 0 | 1 | 811 | 62 | 873 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002325368.1 | 3e-36 | 82 | 335 | 7 | 261 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002522031.1 | 0 | 1 | 811 | 168 | 979 | o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis] |
| RefSeq | XP_002522031.1 | 4e-38 | 64 | 335 | 95 | 367 | o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis] |
| RefSeq | XP_002522031.1 | 7e-34 | 64 | 347 | 61 | 345 | o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4gz6_D | 0 | 190 | 577 | 6 | 390 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 4gz6_D | 0 | 593 | 798 | 514 | 718 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 4gz6_D | 3e-27 | 21 | 172 | 6 | 158 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 4gz6_D | 7e-21 | 2 | 132 | 21 | 152 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 4gz6_D | 2e-18 | 2 | 100 | 55 | 153 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO795247 | 461 | 352 | 812 | 0 |
| HO778725 | 450 | 363 | 812 | 0 |
| HO780311 | 400 | 1 | 398 | 0 |
| HO780311 | 226 | 111 | 335 | 4e-34 |
| HO795247 | 52 | 300 | 351 | 3e-20 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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