| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g003606m |
| Family | GH3 |
| Protein Properties | Length: 809 Molecular Weight: 88790.1 Isoelectric Point: 7.9976 |
| Chromosome | Chromosome/Scaffold: 00006 Start: 116546 End: 120380 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH3 | 87 | 359 | 0 |
| AIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGE DPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQG KASCIMCSYNQVNGVPACLRGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKAGMDINC | |||
| Full Sequence |
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| Protein Sequence Length: 809 Download |
| MSRPFMSIQL RERILFRVLQ LIVVVNVIAF SNSKPVLNKP DFPCKPPHFD SYPFCNTSLS 60 ISTRAKSLIS LLTLQEKIQQ LSDNASAIPR LGIPAYEWWS ESLHGIASNG PGVNFNGTVS 120 SVTSFPQVLV SAASFNRSLW SNIGSAVAVE ARAMYNLGQA GLTFWAPNIN IFRDPRWGRG 180 QETPGEDPMV VSAYAVEFVK SFQGENWKSD DGGIGFGFRE KRVLKGFGEE SDRGDELMLS 240 ACCKHLIAYD LEKWGNFSRY SFNAMITEQD TEDTFQPPFR SCIEQGKASC IMCSYNQVNG 300 VPACLRGDLF QKARNEWGFK GYITSDCDAV ATIFEYQNYT KTHEDSAAGV LKAGMDINCG 360 TCMLRHTQSA IDKGKVQEKD IDRALLNLFS VQLRLGLFNG DPRKGKYGKL GPDDVCTSEH 420 KKLALDAARQ GIVLLKNDKK FLPLNKNAVS SLAIIGPLVN NISQMGGGYT GIPCSPKSLL 480 RGLEAYVSKT HYASGCHDVP CNSDAGFHEA VRIAKKADFV IVVAGLDLTQ ETEDRDRVSL 540 LLPGQQMSLV TSVARTSKRP VILVLTGGGP LDVSFAEADS QISSILWIGY PGEAGAKALA 600 EIIFGDFNPG GRLPMTWYPE SFTKVPMNDM NMRADSSRQY PGRSYRFYTG TQVYGFGHGL 660 SYTNYSYKFL SAPSELTISA SLKAGSDKNI LQQTGSRLDY VHIDEVTSCT SLRFHVQISV 720 TNAGDVDGSH VVMLFARVPK VSQGTPEKQL IGFDRVHTVA KGSKEISFGV DPCEQLSIAN 780 KHGRRILPLG NHVLMVGELR HSLTIETY* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 4.0e-47 | 67 | 497 | 439 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 3.0e-53 | 73 | 384 | 343 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| pfam01915 | Glyco_hydro_3_C | 3.0e-58 | 432 | 663 | 240 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 2.0e-78 | 78 | 797 | 772 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 17 | 806 | 793 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC41913.1 | 0 | 74 | 806 | 2 | 731 | putative beta-xylosidase [Arabidopsis thaliana] |
| EMBL | CBI25718.1 | 0 | 13 | 806 | 6 | 767 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_196618.1 | 0 | 6 | 806 | 1 | 791 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| RefSeq | XP_002264031.1 | 0 | 13 | 806 | 6 | 788 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299457.1 | 0 | 31 | 808 | 20 | 780 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 123 | 797 | 91 | 722 | A Chain A, Crystal Structure Of A Glycosyltransferase Involved In The Glycosylation Of The Major Capsid Of Pbcv-1 |
| PDB | 3u48_A | 0 | 123 | 797 | 91 | 722 | A Chain A, Crystal Structure Of A Glycosyltransferase Involved In The Glycosylation Of The Major Capsid Of Pbcv-1 |
| PDB | 3u4a_B | 0 | 123 | 797 | 91 | 722 | A Chain A, Crystal Structure Of A Glycosyltransferase Involved In The Glycosylation Of The Major Capsid Of Pbcv-1 |
| PDB | 3u4a_A | 0 | 123 | 797 | 91 | 722 | A Chain A, Crystal Structure Of A Glycosyltransferase Involved In The Glycosylation Of The Major Capsid Of Pbcv-1 |
| PDB | 2x41_A | 2e-38 | 64 | 765 | 3 | 668 | A Chain A, Crystal Structure Of A Glycosyltransferase Involved In The Glycosylation Of The Major Capsid Of Pbcv-1 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EY696995 | 247 | 214 | 460 | 0 |
| EY746825 | 240 | 219 | 457 | 0 |
| FC926547 | 220 | 444 | 663 | 0 |
| EY696995 | 46 | 457 | 502 | 0.00000000000001 |
| FC926547 | 19 | 664 | 682 | 1.8 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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