Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g003612m |
Family | GH35 |
Protein Properties | Length: 808 Molecular Weight: 90004.7 Isoelectric Point: 8.3592 |
Chromosome | Chromosome/Scaffold: 00004 Start: 347654 End: 352401 |
Description | beta-galactosidase 16 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 37 | 342 | 0 |
LIINGHRKILFSGSIHYPRSTPQMWPRLIAKAKEGGLDVVQTLVFWNLHEPQPGQFDFSGRRDLVRFIKEVQAQGLYVCLRIGPFIEGEWGYGGLPFWLH DVPGIVFRSDNEPFKFHMKRYATMIVNMMKAARLYASQGGPIILSQIENEYGMVEHSFLEKGPPYVRWAAKLAVDLQTGVPWVMCKQDDAPDPVINACNG RQCGETFAGPNSPDKPAIWTENWTSFYQVYGDEARIRSAEDIAYHVALFIAKMKGSYVNYYMYHGGTNFGRTASAYVLTGYYDQAPLDEYGLLRQPKWGH LKELHS |
Full Sequence |
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Protein Sequence Length: 808 Download |
MGQCQLLCLF GLLLTTIGGS DGGGGGGNNV TYDGRSLIIN GHRKILFSGS IHYPRSTPQM 60 WPRLIAKAKE GGLDVVQTLV FWNLHEPQPG QFDFSGRRDL VRFIKEVQAQ GLYVCLRIGP 120 FIEGEWGYGG LPFWLHDVPG IVFRSDNEPF KFHMKRYATM IVNMMKAARL YASQGGPIIL 180 SQIENEYGMV EHSFLEKGPP YVRWAAKLAV DLQTGVPWVM CKQDDAPDPV INACNGRQCG 240 ETFAGPNSPD KPAIWTENWT SFYQVYGDEA RIRSAEDIAY HVALFIAKMK GSYVNYYMYH 300 GGTNFGRTAS AYVLTGYYDQ APLDEYGLLR QPKWGHLKEL HSAVKLCLKP MLSGVLVSMN 360 FSKLQEAFIF QGSSECAAFL VNKDKRNNAT VYFSNLMYEL PPLSISILPD CKTVAFNTAK 420 LDSVEQWEEY KEAIPTYDET SLRANFLLEQ MNTTKDASDY LWYNFRFKHD PSDSESVLKV 480 SSLGHVLHAF INGEFVGSAH GKHSDKSFTL EKMVHLINGT NNVSLLSVMV GLPDSGAYLE 540 RRVAGLRNVS IQGAKELKDF SSFSWGYQVG LLGEKLQIFT DYGSRIVPWS RYGSSTHQPL 600 TWYKTVFDAP TGSDPVAINL ISMGKGEAWV NGQSIGRYWV SFLTPQGTPS QSWYHIPRSF 660 LKPTGNLLVL LEEENGYPPG ISIDTVSVTT LCGHVSDSHL PPVISWRSQN QRTLKTHKRI 720 PGRRPKVQIR CPSGRKISKI LFASYGNPNG NCENYAIGSC HSSNSRAIVE KACLGKRSCT 780 VPVWTEKFYG DPCPGIPKAL LVDAQCT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 1.0e-8 | 52 | 188 | 151 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 4.0e-23 | 30 | 320 | 343 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 7.0e-25 | 729 | 806 | 81 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 4.0e-149 | 36 | 344 | 323 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 29 | 807 | 822 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18990.1 | 0 | 27 | 807 | 25 | 817 | unnamed protein product [Vitis vinifera] |
EMBL | CBI18991.1 | 0 | 31 | 806 | 33 | 820 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002284529.1 | 0 | 31 | 806 | 25 | 812 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302225.1 | 0 | 26 | 807 | 4 | 798 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306647.1 | 0 | 29 | 807 | 1 | 764 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 8e-37 | 36 | 340 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.002 | 454 | 672 | 374 | 572 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 2e-30 | 30 | 331 | 11 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 2e-30 | 30 | 331 | 11 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_B | 2e-30 | 30 | 331 | 11 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |