Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g003932m |
Family | GH18 |
Protein Properties | Length: 786 Molecular Weight: 87984.7 Isoelectric Point: 7.9875 |
Chromosome | Chromosome/Scaffold: 04649 Start: 1182 End: 4782 |
Description | S-locus lectin protein kinase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH18 | 33 | 361 | 4.2039e-45 |
NLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYG FRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSIS GRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDD VEAVRAKIAYAKEKRLLGYYAWQVSFDDH |
Full Sequence |
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Protein Sequence Length: 786 Download |
MASIIISIIF HTLLYSELHP AKAKPWIRVG YLNLSEVSTI SGINYDLFTH LICSSADINS 60 TTYQLSLSLP SDENQIAKFA DTVKKKNPSI TTILSIGQGK DTNYSIYSSM VRNSSHRKSF 120 IDSSIRIARL YGFRGLDFAW TAPNTSTDMF NIGLLFDEWR IAATKLDAKN STRQQSLLIL 180 TARFRYSPPA NSYLLNSIQR NLNWIHAVTA SYYEPVSTNF TAPPAALYGS ISGRFARSTD 240 QVLKAWIERG LSADKLVMCL PFYGYAWTLV KPEDNGIGAA AAGPALYDSG LVTYKKIKNH 300 IKTYGPDVQV MYNSTYEVNY FSTGTVWFGF DDVEAVRAKI AYAKEKRLLG YYAWQVSFDD 360 HDWLLSQAAA QKDSITSASV DKDEHSSNRR LSIALISTAA AALTLLLGCC AYKYNQMKRL 420 NLIEEDSAKA SNTRANNETE AGDFNRNVPN LRVYSLADIE AATERFSIRN KLGEGGYGPV 480 YKGVLPCGEV IAVKKLSKTS TQGFEEFKNE VMLTAKLQHV NLIRVLGFCI DSEERMLIYE 540 YMPNKSLDCY LFDPIRKLIL DWKKRVHIIE GITQGLLYLQ EYSRLTIIHR DLKVSNILLG 600 EAMKPKISDF GMARIFAKES LEENTEQVVG TIGYIPPEYA TKGVYSTKSD VFSFGVLLLQ 660 IISGKRLSML CGINENLSIL EHAYELWKGG KGVEFVDSFL DDRNSPCKLM RCLEIALLCV 720 QENPNDRPSM LEVSSMLKNE TTNINTPKKP AFSKQVDEIG IELLSTTNLE KCSAYDVSFS 780 EVVAR* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
smart00221 | STYKc | 4.0e-47 | 471 | 737 | 282 | + Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
smart00219 | TyrKc | 2.0e-47 | 471 | 737 | 282 | + Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily. |
pfam00704 | Glyco_hydro_18 | 9.0e-58 | 39 | 359 | 326 | + Glycosyl hydrolases family 18. |
smart00636 | Glyco_18 | 2.0e-62 | 39 | 359 | 333 | + Glyco_18 domain. |
cd02879 | GH18_plant_chitinase_class_V | 2.0e-93 | 25 | 365 | 348 | + The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes. The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004672 | protein kinase activity |
GO:0005524 | ATP binding |
GO:0005975 | carbohydrate metabolic process |
GO:0006468 | protein phosphorylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI35714.1 | 0 | 3 | 785 | 402 | 1130 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263709.1 | 0 | 21 | 785 | 20 | 764 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002263792.1 | 0 | 3 | 785 | 7 | 753 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002270006.1 | 0 | 21 | 785 | 20 | 765 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324558.1 | 0 | 1 | 785 | 1 | 763 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3alg_A | 0 | 27 | 371 | 4 | 343 | A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From Nicotiana Tobaccum In Complex With Nag4 |
PDB | 3alf_A | 0 | 27 | 371 | 4 | 343 | A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum |
PDB | 3aqu_D | 0 | 40 | 380 | 18 | 350 | A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana |
PDB | 3aqu_C | 0 | 40 | 380 | 18 | 350 | A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana |
PDB | 3aqu_B | 0 | 40 | 380 | 18 | 350 | A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana |