Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g003947m |
Family | GT4 |
Protein Properties | Length: 785 Molecular Weight: 89376.5 Isoelectric Point: 5.9709 |
Chromosome | Chromosome/Scaffold: 00013 Start: 1422592 End: 1426092 |
Description | sucrose synthase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 544 | 709 | 0 |
KDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGA FVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKV |
Full Sequence |
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Protein Sequence Length: 785 Download |
MAQQFIETLS KSLTLLSSIE RLGCGIYKRQ QILSLVDAES NGAAIADVLN ATQEAAVSSP 60 WVALALRTSP GVWCYIRVNV QTVDVEEISV SKYLLFKEEI VDGRKSNGNF AFEVDFEPFR 120 ALPHPTLSNS IGHGMEFLNR HMSAKLFNDK ESMQSLLEFL RVHSHMGKNM MLNEKIQDLG 180 TLQSSLRMAE KYLSMLAPDT SYAEFEQKFQ EIGLERGWGD NAEHVLGMIQ LLLDLLQAPE 240 SSTLETFLGK IPRVFNVVIF TPHGYFAQDN VLGYPDTGGQ VVYILDQVRA LENEMLLRIK 300 QQGLDITPRI LIITRLLPDA VGTTCGQRVE KVYGTKYSDI LRVPFRTEEG IVRKWISRFE 360 VWPYLETFTE DVATEIIQEL QCKPDLIIGN YSDGNIVASL LAHKLDVTQC TIAHALELTK 420 YPDSDINWKK LDDKYHFSCQ FTADLFAMNR TDFIITSTFQ EIAGSKDTVG QYESHTAFSL 480 PGLYRVVNGI DAFDPKFNIV SPGADMTIYF PYMEEKRRLK HFHSEIEELL YSPVENKEHL 540 CVLKDSSKPI LFTMARLDRV KNLTGLVEWY GKNAKLRELV NLVVVGGDRR KESKDLEEQA 600 EMKKMYGLID TYKLNGQFRW ISSQMNRVRN GELYRYICDT KGAFVQPALY EAFGLTVVEA 660 MTCGLPTFAT CNGGPAEIIV HGKSGFHIDP YKGDQATGIL VDFFEKCKVD PGHWDEISQG 720 GLKRIQEKYT WKIYSERLLN LSGVYGFWKH LSKLDCREKN RYLEMFYSLM YRKQVQTVPL 780 AVDE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 3.0e-61 | 257 | 739 | 491 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 4.0e-120 | 256 | 739 | 485 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 23 | 784 | 773 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 23 | 781 | 771 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 19 | 532 | 524 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD28641.1 | 0 | 13 | 781 | 28 | 804 | sucrose synthase [Gossypium hirsutum] |
GenBank | ACV72640.1 | 0 | 13 | 781 | 28 | 803 | sucrose synthase 1 [Gossypium hirsutum] |
DDBJ | BAA88905.1 | 0 | 1 | 783 | 12 | 805 | sucrose synthase [Citrus unshiu] |
DDBJ | BAA89049.1 | 0 | 1 | 783 | 12 | 805 | sucrose synthase [Citrus unshiu] |
RefSeq | XP_002326309.1 | 0 | 13 | 783 | 26 | 803 | hypothetical protein POPTRDRAFT_826368 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 1 | 784 | 18 | 808 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3s29_G | 0 | 1 | 784 | 18 | 808 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3s29_F | 0 | 1 | 784 | 18 | 808 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3s29_E | 0 | 1 | 784 | 18 | 808 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3s29_D | 0 | 1 | 784 | 18 | 808 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794519 | 773 | 19 | 783 | 0 |
BU103683 | 774 | 19 | 783 | 0 |
CX109054 | 599 | 79 | 676 | 0 |
FG227316 | 453 | 254 | 706 | 0 |
GW837855 | 412 | 320 | 731 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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