| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g003990m |
| Family | AA3 |
| Protein Properties | Length: 782 Molecular Weight: 85645.3 Isoelectric Point: 7.5307 |
| Chromosome | Chromosome/Scaffold: 00015 Start: 474784 End: 478540 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 264 | 771 | 0 |
| ASPSLVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCARSNLSLLEGKTMDQMYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVA NEWCDEYELKLFESDLYKEAMEVVCERMGVQSEVEEEGFNNAVLRRGCKELGYPVNNIPRNSPPDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAIL PGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNANIGKNLHLHPVTMAWGYFPKTSSSGEWPEEKKTSYEG GIMTAMSTTVGNFGKSGYGAVIQTPALHPGMFSSLMPWVSGADIKLRMCKFSRTAHIFVLARDQGSGTVNSPYSISYQMEAMDEENLKKGIEKILRILAA AGAEEIGTHHCKGKIINVKKASSEEFERFVKEESSRPLRDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAI AYCTAQSV | |||
| Full Sequence |
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| Protein Sequence Length: 782 Download |
| MVVELGSIDK ETLQLWGEEN HCYVNSLSSQ EMESLSALCD TFLPAVDVKT AASIDKDIAD 60 FFRASASAAG TPERLGGLMS ERLKHPKKWL VRLCLWLLST CIGSLVLCGR YCFSSKFPYM 120 HSFTQLPQKK RDAVLVSWSL SYFYHLRMLY KAMKLLILLV FFTQVNEKNE NLSWKAIGYK 180 GPDPEFKTKS MQRKTLRNEG LNDDDDDEGQ NDDGHEEEAE LYGPLYKGLI NMQLPRNIVA 240 DSLRQVGFPV SVRNKRNAAP SSIASPSLVI KCDAVVVGSG SGGGLIAGVL AKAGYKVLVL 300 EKGSYCARSN LSLLEGKTMD QMYLAGGMLA TDDMGVILLA GSTVGGGSTI NWSASIKTPK 360 HVANEWCDEY ELKLFESDLY KEAMEVVCER MGVQSEVEEE GFNNAVLRRG CKELGYPVNN 420 IPRNSPPDHY CGWCCLGCKD GSKKGTSETW LVDLVNSGNS AILPGCEAIE VLHKKRRDRN 480 VATGVAFEFQ YMGAKDICVV ESKVTIVACG ALSTPNLLKR SGLKNANIGK NLHLHPVTMA 540 WGYFPKTSSS GEWPEEKKTS YEGGIMTAMS TTVGNFGKSG YGAVIQTPAL HPGMFSSLMP 600 WVSGADIKLR MCKFSRTAHI FVLARDQGSG TVNSPYSISY QMEAMDEENL KKGIEKILRI 660 LAAAGAEEIG THHCKGKIIN VKKASSEEFE RFVKEESSRP LRDLSTPLSS AHQMGSCRMG 720 IDPKTSVVNQ MGETWGVEGL YLADTSVFPT ALGVNPMVTV QAIAYCTAQS VLDVLRRKKS 780 N* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 1.0e-6 | 712 | 750 | 39 | + choline dehydrogenase; Validated | ||
| pfam05199 | GMC_oxred_C | 1.0e-24 | 638 | 765 | 131 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 8.0e-36 | 293 | 765 | 530 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 3.0e-72 | 319 | 537 | 222 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29206.1 | 0 | 2 | 775 | 10 | 644 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_193673.2 | 0 | 32 | 779 | 1 | 726 | alcohol oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002269629.1 | 0 | 2 | 779 | 10 | 787 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002328753.1 | 0 | 32 | 781 | 1 | 747 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519938.1 | 0 | 74 | 780 | 7 | 710 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ljp_B | 0.000003 | 440 | 763 | 204 | 518 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3ljp_A | 0.000003 | 440 | 763 | 204 | 518 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3nne_H | 0.000008 | 440 | 763 | 204 | 518 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_G | 0.000008 | 440 | 763 | 204 | 518 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_F | 0.000008 | 440 | 763 | 204 | 518 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DC883850 | 464 | 319 | 782 | 0 |
| DY299302 | 341 | 4 | 343 | 0 |
| FC879743 | 314 | 4 | 317 | 0 |
| DY260954 | 252 | 531 | 782 | 0 |
| FC928484 | 242 | 531 | 772 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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