Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g004275m |
Family | CBM57 |
Protein Properties | Length: 765 Molecular Weight: 84228.9 Isoelectric Point: 5.8083 |
Chromosome | Chromosome/Scaffold: 00612 Start: 29430 End: 38792 |
Description | Leucine-rich repeat transmembrane protein kinase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 407 | 570 | 9e-28 |
INCGGSPTEFEENDYEEDLNTQGPSNFGIVSDRWAYSSTGVYVGNESSKYLAANQYGLNVSGAEYYKTARLAPQSLKYYGLCMLKGSYTVKLHFAEIMFT NDQTYKSLGKRMFDVSIQGKQVLKDFDIMEEAGGVGIGITREFKDVSVNGSTMEIHLYWAGKGT |
Full Sequence |
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Protein Sequence Length: 765 Download |
MGKIVSVFVV LGFLVLNCFA NFGSHAQRLP DDEVQTLQSI FRKLNFRNGQ VNQTSCTEGS 60 WNVTIDDSNG SNFTCDCTYS NNTVCHVTVI LLKGFNLAGV IPEEFGNLTF LQEVDLSRNY 120 FNGSLPKSFA RLQNLTKLLI LGNRLSGSIP LEIGDISTLE ELVLEDNQLV GPLPENLGNL 180 KSLRRILLSS NNFTGSIPES YGNLKNLTEF RIDGSNLTGR IPNFIGNWTK LDRLDLQGTS 240 LEGPIPSTIS QLKNLTELRI SDLKGSSSSF PNLQDMKKME RLILRNCLIT GRIPEYIEDM 300 TDLKILDLSF NQLTGPVPGI LQNLKKIDYI FLTNNSLSGT LPDWILTSEK NLDLSYNNFT 360 ESSPATCRES RVNILSSFSS TGSNSVSWCL KKDLPCPKEA KHYSLFINCG GSPTEFEEND 420 YEEDLNTQGP SNFGIVSDRW AYSSTGVYVG NESSKYLAAN QYGLNVSGAE YYKTARLAPQ 480 SLKYYGLCML KGSYTVKLHF AEIMFTNDQT YKSLGKRMFD VSIQGKQVLK DFDIMEEAGG 540 VGIGITREFK DVSVNGSTME IHLYWAGKGT NAIPYRGVYG PLISAITVTP NFEVDTGGGL 600 SAGAIVGIVA GSCAVVIILL FILWRLGYLG GKNVEDKELR GLDLQTGYFT LRQIKAATNN 660 FDAANKIGEG GFGPVYKGTL SDGAVIAVKQ LSSKSKQGNR EFVNEIGMIS ALQHQNLVKL 720 YGCCIEGNQL LLVYEYLENN SLARALFGNA ITKITYTFSL HLWN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00113 | PLN00113 | 5.0e-30 | 96 | 342 | 247 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 4.0e-37 | 96 | 366 | 272 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 2.0e-37 | 96 | 372 | 303 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 1.0e-42 | 60 | 366 | 335 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
pfam11721 | Malectin | 3.0e-53 | 403 | 586 | 186 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Gene Ontology | |
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GO Term | Description |
GO:0004672 | protein kinase activity |
GO:0005515 | protein binding |
GO:0006468 | protein phosphorylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI20154.1 | 0 | 26 | 748 | 195 | 912 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002283453.1 | 0 | 20 | 748 | 20 | 740 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002283477.1 | 0 | 18 | 749 | 16 | 747 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316847.1 | 0 | 1 | 748 | 7 | 760 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002524510.1 | 0 | 3 | 759 | 9 | 766 | kinase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3rj0_A | 3e-24 | 90 | 364 | 396 | 694 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3rj0_A | 4e-23 | 97 | 371 | 278 | 535 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3rj0_A | 7e-17 | 97 | 297 | 352 | 555 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3rj0_A | 0.000000000000004 | 87 | 343 | 465 | 719 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3rj0_A | 0.000000001 | 157 | 364 | 97 | 308 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |